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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4anmWULCasein kinase II subunit alpha2.7.11.1

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
4anmWULCasein kinase II subunit alpha2.7.11.11.000
3be9P04Casein kinase II subunit alpha2.7.11.10.608
2pvhP19Casein kinase II subunit alpha2.7.11.10.582
4dgmAGICasein kinase II subunit alpha2.7.11.10.570
1m2pHNACasein kinase II subunit alpha2.7.11.10.557
2pvlP55Casein kinase II subunit alpha2.7.11.10.552
1dawANPCasein kinase II subunit alpha2.7.11.10.546
4dgnLU2Casein kinase II subunit alpha2.7.11.10.546
2pvmP29Casein kinase II subunit alpha2.7.11.10.529
1dayGNPCasein kinase II subunit alpha2.7.11.10.517
3ofm4B0Casein kinase II subunit alpha'2.7.11.10.503
3q9xEMOCasein kinase II subunit alpha2.7.11.10.501
1om1IQACasein kinase II subunit alpha2.7.11.10.497
2pvnP63Casein kinase II subunit alpha2.7.11.10.487
4grb0XGCasein kinase II subunit alpha2.7.11.10.487
3at4CCKCasein kinase II subunit alpha2.7.11.10.462
3u4uLNHCasein kinase II subunit alpha2.7.11.10.451
1m2rMNYCasein kinase II subunit alpha2.7.11.10.441
4dgo0JWCasein kinase II subunit alpha2.7.11.10.440