Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4a95NHWGlycylpeptide N-tetradecanoyltransferase

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
4a95NHWGlycylpeptide N-tetradecanoyltransferase/1.000
4b14NHWGlycylpeptide N-tetradecanoyltransferase/0.689
4b13NHWGlycylpeptide N-tetradecanoyltransferase/0.632
2yneNHWGlycylpeptide N-tetradecanoyltransferase/0.630
4a30MYAGlycylpeptide N-tetradecanoyltransferase/0.619
4b10NHWGlycylpeptide N-tetradecanoyltransferase/0.618
5a27MYAGlycylpeptide N-tetradecanoyltransferase/0.616
4b12NHWGlycylpeptide N-tetradecanoyltransferase/0.615
5ag6MYAGlycylpeptide N-tetradecanoyltransferase/0.601
5ag7MYAGlycylpeptide N-tetradecanoyltransferase/0.590
4a32MYAGlycylpeptide N-tetradecanoyltransferase/0.589
4cgpMYAGlycylpeptide N-tetradecanoyltransferase/0.578
4a2zMYAGlycylpeptide N-tetradecanoyltransferase/0.576
2yncYNCGlycylpeptide N-tetradecanoyltransferase/0.571
4a33MYAGlycylpeptide N-tetradecanoyltransferase/0.562
4c2xNHWGlycylpeptide N-tetradecanoyltransferase 2/0.560
2nmtNHMGlycylpeptide N-tetradecanoyltransferase2.3.1.970.527
4bbhNHWGlycylpeptide N-tetradecanoyltransferase/0.504
4b11NHWGlycylpeptide N-tetradecanoyltransferase/0.502
4c68NHWGlycylpeptide N-tetradecanoyltransferase/0.500
4ucnMYAGlycylpeptide N-tetradecanoyltransferase/0.483
4c2yMYAGlycylpeptide N-tetradecanoyltransferase 1/0.477
4c2zMYAGlycylpeptide N-tetradecanoyltransferase 1/0.461
2wsaMYAGlycylpeptide N-tetradecanoyltransferase/0.460
5ag5MYAGlycylpeptide N-tetradecanoyltransferase/0.441