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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3zbtFADFerredoxin--NADP reductase1.18.1.2

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
3zbtFADFerredoxin--NADP reductase1.18.1.21.000
1gr1FADFerredoxin--NADP reductase1.18.1.20.665
1qh0FADFerredoxin--NADP reductase1.18.1.20.665
1qgyFADFerredoxin--NADP reductase1.18.1.20.662
1bjkFADFerredoxin--NADP reductase1.18.1.20.661
1e64FADFerredoxin--NADP reductase1.18.1.20.654
1h85FADFerredoxin--NADP reductase1.18.1.20.653
4af7FADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.625
1go2FADFerredoxin--NADP reductase1.18.1.20.624
1w35FADFerredoxin--NADP reductase1.18.1.20.621
4bprFADFerredoxin--NADP reductase1.18.1.20.621
1fncFDAFerredoxin--NADP reductase, chloroplastic1.18.1.20.619
4c43FADFerredoxin--NADP reductase1.18.1.20.615
4af6FADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.611
3zc3FADFerredoxin--NADP reductase1.18.1.20.609
2b5oFADFerredoxin--NADP reductase1.18.1.20.607
1b2rFADFerredoxin--NADP reductase1.18.1.20.601
1sm4FADFerredoxin--NADP reductase/0.601
1ewyFADFerredoxin--NADP reductase1.18.1.20.600
1fnbFADFerredoxin--NADP reductase, chloroplastic1.18.1.20.598
3mhpFADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.596
1gjrFADFerredoxin--NADP reductase1.18.1.20.594
1queFADFerredoxin--NADP reductase1.18.1.20.594
3vo2FADFerredoxin--NADP reductase/0.590
3qfsFADNADPH--cytochrome P450 reductase/0.585
1bx1FADFerredoxin--NADP reductase, chloroplastic1.18.1.20.580
1e63FADFerredoxin--NADP reductase1.18.1.20.576
1e62FADFerredoxin--NADP reductase1.18.1.20.571
1gaqFADFerredoxin/0.571
3w5uFADFerredoxin/0.570
1ogiFADFerredoxin--NADP reductase1.18.1.20.567
3fpkFADFerredoxin-NADP reductase/0.565
1qgzFADFerredoxin--NADP reductase1.18.1.20.559
1fndFADFerredoxin--NADP reductase, chloroplastic1.18.1.20.558
2rc6FADFerredoxin--NADP reductase/0.558
1w87FADFerredoxin--NADP reductase1.18.1.20.555
4yaoFADNADPH--cytochrome P450 reductase/0.555
1gawFADFerredoxin/0.548
1ogjFADFerredoxin--NADP reductase1.18.1.20.543
1h42FADFerredoxin--NADP reductase1.18.1.20.542
2ok8FADFerredoxin--NADP reductase, apicoplast/0.538
1ja1FADNADPH--cytochrome P450 reductase/0.534
1amoFADNADPH--cytochrome P450 reductase/0.531
4uajFADNa(+)-translocating NADH-quinone reductase subunit F/0.516
4k1xFADNADPH:ferredoxin reductase/0.506
1f20FADNitric oxide synthase, brain1.14.13.390.503
2rc5FADFerredoxin--NADP reductase/0.501
4fk8FADFerredoxin--NADP reductase/0.496
1fdrFADFerredoxin--NADP reductase1.18.1.20.492
3qftFADNADPH--cytochrome P450 reductase/0.491
1a8pFADFerredoxin--NADP reductase/0.490
3ojxFADNADPH--cytochrome P450 reductase/0.489
2bgiFADNADPH:ferredoxin reductase/0.487
2xncFADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.487
2vnjFADNADPH:ferredoxin reductase/0.486
3qe2FADNADPH--cytochrome P450 reductase/0.486
1j9zFADNADPH--cytochrome P450 reductase/0.479
2bpoFADNADPH--cytochrome P450 reductase/0.477
3jqrFADFerredoxin--NADP reductase, apicoplast/0.476
2qdxFADFerredoxin--NADP+ reductase/0.472
1cqxFADFlavohemoprotein/0.471
2r6hFADNa(+)-translocating NADH-quinone reductase subunit F/0.470
2vnhFADNADPH:ferredoxin reductase/0.468
3crzFADFerredoxin--NADP+ reductase/0.466
1bx0FADFerredoxin--NADP reductase, chloroplastic1.18.1.20.462
3qfcFADNADPH--cytochrome P450 reductase/0.461
4j0v1H7Beta-secretase 13.4.23.460.457
3otwCOAPhosphopantetheine adenylyltransferase/0.456
4a322CDGlycylpeptide N-tetradecanoyltransferase/0.456
1krhFADBenzoate 1,2-dioxygenase electron transfer component1.18.1.30.455
1ndhFADNADH-cytochrome b5 reductase 31.6.2.20.454
2cndFADNitrate reductase [NADH]1.7.1.10.452
2vnkFADNADPH:ferredoxin reductase/0.452
3p0fBAUUridine phosphorylase 22.4.2.30.449
2e0nSAHPrecorrin-2 C20-methyltransferase/0.443
2v1aFMNNPH1-1/0.441