sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Cavities are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 3wec | AUI | Cytochrome P450 |
| PDB ID | HET | Uniprot Name | EC Number | Cavity Similarity |
Align |
|---|---|---|---|---|---|
| 3wec | AUI | Cytochrome P450 | / | 1.000 | |
| 3ua1 | 08Y | Cytochrome P450 3A4 | / | 0.467 | |
| 2j0d | ERY | Cytochrome P450 3A4 | / | 0.460 | |
| 4dvq | 1CA | Cytochrome P450 11B2, mitochondrial | 1.14.15.4 | 0.457 | |
| 1eup | ASD | 6-deoxyerythronolide B hydroxylase | / | 0.455 | |
| 1pkf | EPD | Epothilone C/D epoxidase | 1.14 | 0.455 | |
| 1q5d | EPB | Epothilone C/D epoxidase | 1.14 | 0.451 | |
| 3a1l | 2CC | Cytochrome P450 | / | 0.447 | |
| 4uym | VOR | 14-alpha sterol demethylase Cyp51B | / | 0.447 | |
| 3p3z | P3Z | Putative cytochrome P450 | / | 0.444 | |
| 4tuv | CPZ | Cytochrome P450 119 | 1.14 | 0.443 | |
| 1jip | KTN | 6-deoxyerythronolide B hydroxylase | / | 0.442 | |
| 3p99 | LNP | Lanosterol 14-alpha-demethylase | / | 0.442 |