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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3w0uHPWLactoylglutathione lyase4.4.1.5

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
3w0uHPWLactoylglutathione lyase4.4.1.51.000
1qipGNBLactoylglutathione lyase4.4.1.50.571
1qinGIPLactoylglutathione lyase4.4.1.50.512
3w0tHPULactoylglutathione lyase4.4.1.50.508
1bh5GTXLactoylglutathione lyase4.4.1.50.471
3vw9HPJLactoylglutathione lyase4.4.1.50.459
2za0MGILactoylglutathione lyase4.4.1.50.453