Cavities are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
3uel | A1R | Poly(ADP-ribose) glycohydrolase | 3.2.1.143 |
PDB ID | HET | Uniprot Name | EC Number | Cavity Similarity |
Align |
---|---|---|---|---|---|
3uel | A1R | Poly(ADP-ribose) glycohydrolase | 3.2.1.143 | 1.000 | |
4na4 | A1R | Poly(ADP-ribose) glycohydrolase | 3.2.1.143 | 0.610 | |
4b1j | A1R | Poly(ADP-ribose) glycohydrolase | 3.2.1.143 | 0.607 | |
4b1h | AR6 | Poly(ADP-ribose) glycohydrolase | 3.2.1.143 | 0.597 | |
4b1i | A8P | Poly(ADP-ribose) glycohydrolase | 3.2.1.143 | 0.564 | |
4epq | 0RR | Poly(ADP-ribose) glycohydrolase | / | 0.553 | |
5cb5 | APR | O-acetyl-ADP-ribose deacetylase | / | 0.490 | |
5cb3 | APR | O-acetyl-ADP-ribose deacetylase | / | 0.475 |