Cavities are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
3tk3 | CPZ | Cytochrome P450 2B4 | 1.14.14.1 |
PDB ID | HET | Uniprot Name | EC Number | Cavity Similarity |
Align |
---|---|---|---|---|---|
3tk3 | CPZ | Cytochrome P450 2B4 | 1.14.14.1 | 1.000 | |
3ibd | CPZ | Cytochrome P450 2B6 | 1.14.13 | 0.610 | |
1suo | CPZ | Cytochrome P450 2B4 | 1.14.14.1 | 0.571 | |
4r21 | STR | Cytochrome P450 family 17 polypeptide 2 | / | 0.481 | |
3t3q | 9PL | Cytochrome P450 2A6 | 1.14.13 | 0.472 | |
4y8w | STR | Steroid 21-hydroxylase | / | 0.466 | |
3p6n | DSO | Camphor 5-monooxygenase | 1.14.15.1 | 0.456 | |
4ejh | 0QA | Cytochrome P450 2A13 | 1.14.14.1 | 0.456 | |
1re9 | DSO | Camphor 5-monooxygenase | 1.14.15.1 | 0.452 | |
2ca0 | PXI | Cytochrome P450 monooxygenase PikC | / | 0.452 | |
3ruk | AER | Steroid 17-alpha-hydroxylase/17,20 lyase | / | 0.448 | |
3ol5 | SAW | Camphor 5-monooxygenase | 1.14.15.1 | 0.445 | |
4jx1 | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.444 |