scPDB - Distribution of Cavity Similarity values of 3rql entry / Site 2

Distribution of Cavity similarities measured by Shaper

You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
3rql	X2D	Nitric oxide synthase, brain	1.14.13.39

Complex with similar cavities

PDB ID	HET	Uniprot Name	EC Number	Cavity Similarity
3rql	X2D	Nitric oxide synthase, brain	1.14.13.39	1.000
3nlz	3XD	Nitric oxide synthase, brain	1.14.13.39	0.781
3jwt	JI5	Nitric oxide synthase, brain	1.14.13.39	0.735
3png	8CX	Nitric oxide synthase, brain	1.14.13.39	0.730
4imt	1EW	Nitric oxide synthase, brain	1.14.13.39	0.709
3pnf	8BX	Nitric oxide synthase, brain	1.14.13.39	0.705
3uft	HW7	Nitric oxide synthase, brain	1.14.13.39	0.679
4k5g	Q13	Nitric oxide synthase, brain	1.14.13.39	0.678
4cx5	HW8	Nitric oxide synthase, brain	1.14.13.39	0.661
3rqm	X2E	Nitric oxide synthase, brain	1.14.13.39	0.646
3svp	JK5	Nitric oxide synthase, brain	1.14.13.39	0.626
3n5w	XFJ	Nitric oxide synthase, brain	1.14.13.39	0.618
3pne	8AX	Nitric oxide synthase, brain	1.14.13.39	0.615
4cx3	HW8	Nitric oxide synthase, brain	1.14.13.39	0.614
4eux	HW1	Nitric oxide synthase, brain	1.14.13.39	0.614
3nlw	3XF	Nitric oxide synthase, brain	1.14.13.39	0.607
3rqk	X2C	Nitric oxide synthase, brain	1.14.13.39	0.606
3n62	XFJ	Nitric oxide synthase, brain	1.14.13.39	0.603
3jx6	JI5	Nitric oxide synthase, brain	1.14.13.39	0.601
4lux	QJ8	Nitric oxide synthase, brain	1.14.13.39	0.593
3jws	JI4	Nitric oxide synthase, brain	1.14.13.39	0.591
3ufu	HW8	Nitric oxide synthase, brain	1.14.13.39	0.589
3ufv	HW9	Nitric oxide synthase, brain	1.14.13.39	0.588
3nlv	3XA	Nitric oxide synthase, brain	1.14.13.39	0.587
3tyl	AXW	Nitric oxide synthase, brain	1.14.13.39	0.587
3tym	08R	Nitric oxide synthase, brain	1.14.13.39	0.583
3jx3	JI5	Nitric oxide synthase, brain	1.14.13.39	0.582
3rqj	Y2B	Nitric oxide synthase, brain	1.14.13.39	0.581
3nny	59R	Nitric oxide synthase, brain	1.14.13.39	0.580
3nlq	JRR	Nitric oxide synthase, brain	1.14.13.39	0.578
3n5v	XFH	Nitric oxide synthase, brain	1.14.13.39	0.577
3nlz	H4B	Nitric oxide synthase, brain	1.14.13.39	0.576
3ufw	HW0	Nitric oxide synthase, brain	1.14.13.39	0.572
4cx4	HW9	Nitric oxide synthase, brain	1.14.13.39	0.572
4imw	1EV	Nitric oxide synthase, brain	1.14.13.39	0.569
4jsf	QJ4	Nitric oxide synthase, brain	1.14.13.39	0.565
3ufs	HW6	Nitric oxide synthase, brain	1.14.13.39	0.564
3jx0	JI4	Nitric oxide synthase, brain	1.14.13.39	0.561
3svq	JK4	Nitric oxide synthase, brain	1.14.13.39	0.559
3ufo	HW4	Nitric oxide synthase, brain	1.14.13.39	0.559
3n5x	XFK	Nitric oxide synthase, brain	1.14.13.39	0.553
3nly	3XC	Nitric oxide synthase, brain	1.14.13.39	0.551
3jwt	H4B	Nitric oxide synthase, brain	1.14.13.39	0.545
3nlr	JRS	Nitric oxide synthase, brain	1.14.13.39	0.541
3n65	XFJ	Nitric oxide synthase, brain	1.14.13.39	0.537
3nlj	JRR	Nitric oxide synthase, brain	1.14.13.39	0.535
3pnf	H4B	Nitric oxide synthase, brain	1.14.13.39	0.530
3jx5	J14	Nitric oxide synthase, brain	1.14.13.39	0.528
3png	H4B	Nitric oxide synthase, brain	1.14.13.39	0.527
1p6j	DP9	Nitric oxide synthase, brain	1.14.13.39	0.524
3n5y	XFL	Nitric oxide synthase, brain	1.14.13.39	0.524
3nln	JRS	Nitric oxide synthase, brain	1.14.13.39	0.522
4k5d	1Q6	Nitric oxide synthase, brain	1.14.13.39	0.521
3b3p	JI7	Nitric oxide synthase, brain	1.14.13.39	0.519
4jsi	Q05	Nitric oxide synthase, brain	1.14.13.39	0.518
3rqj	H4B	Nitric oxide synthase, brain	1.14.13.39	0.517
4k5f	Q14	Nitric oxide synthase, brain	1.14.13.39	0.516
4imu	1ET	Nitric oxide synthase, brain	1.14.13.39	0.515
3n5z	XFM	Nitric oxide synthase, brain	1.14.13.39	0.514
4imt	H4B	Nitric oxide synthase, brain	1.14.13.39	0.514
3nnz	59W	Nitric oxide synthase, brain	1.14.13.39	0.509
3n61	XFJ	Nitric oxide synthase, brain	1.14.13.39	0.508
3ufr	H5W	Nitric oxide synthase, brain	1.14.13.39	0.503
3nlp	JSS	Nitric oxide synthase, brain	1.14.13.39	0.499
3ufp	H4W	Nitric oxide synthase, brain	1.14.13.39	0.499
3jx4	J11	Nitric oxide synthase, brain	1.14.13.39	0.497
3ufq	HW5	Nitric oxide synthase, brain	1.14.13.39	0.496
3jx2	JI4	Nitric oxide synthase, brain	1.14.13.39	0.495
3nlo	JSR	Nitric oxide synthase, brain	1.14.13.39	0.495
4jsg	Q10	Nitric oxide synthase, brain	1.14.13.39	0.493
4k5e	1Q7	Nitric oxide synthase, brain	1.14.13.39	0.493
1zzq	DP9	Nitric oxide synthase, brain	1.14.13.39	0.491
1zzu	DP1	Nitric oxide synthase, brain	1.14.13.39	0.490
3jwu	J11	Nitric oxide synthase, brain	1.14.13.39	0.488
3nlk	JSS	Nitric oxide synthase, brain	1.14.13.39	0.483
3b3o	JI3	Nitric oxide synthase, brain	1.14.13.39	0.477
2hx4	4HX	Nitric oxide synthase, brain	1.14.13.39	0.476
3jx3	H4B	Nitric oxide synthase, brain	1.14.13.39	0.472
3rqm	H4B	Nitric oxide synthase, brain	1.14.13.39	0.471
4lux	H4B	Nitric oxide synthase, brain	1.14.13.39	0.469
4fw0	H4B	Nitric oxide synthase, brain	1.14.13.39	0.468
3rqk	H4B	Nitric oxide synthase, brain	1.14.13.39	0.462
1zzr	DP9	Nitric oxide synthase, brain	1.14.13.39	0.461
3ufu	H4B	Nitric oxide synthase, brain	1.14.13.39	0.459
4jsj	QJ7	Nitric oxide synthase, brain	1.14.13.39	0.458
3tyl	H4B	Nitric oxide synthase, brain	1.14.13.39	0.457
3rql	H4B	Nitric oxide synthase, brain	1.14.13.39	0.456
3pne	H4B	Nitric oxide synthase, brain	1.14.13.39	0.454
1rs6	DP2	Nitric oxide synthase, brain	1.14.13.39	0.451
4cx3	H4B	Nitric oxide synthase, brain	1.14.13.39	0.448
3n60	XFN	Nitric oxide synthase, brain	1.14.13.39	0.447
3n63	XFN	Nitric oxide synthase, brain	1.14.13.39	0.445
3jwv	H4B	Nitric oxide synthase, brain	1.14.13.39	0.442
3ufv	H4B	Nitric oxide synthase, brain	1.14.13.39	0.442