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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3rqkH4BNitric oxide synthase, brain1.14.13.39

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity
Align
3rqkH4BNitric oxide synthase, brain1.14.13.391.000
3rqkX2CNitric oxide synthase, brain1.14.13.390.820
4euxH4BNitric oxide synthase, brain1.14.13.390.751
3svqH4BNitric oxide synthase, brain1.14.13.390.663
3ufwH4BNitric oxide synthase, brain1.14.13.390.662
3nlwH4BNitric oxide synthase, brain1.14.13.390.657
3ufoH4BNitric oxide synthase, brain1.14.13.390.642
4gqeH4BNitric oxide synthase, brain1.14.13.390.635
3nnyH4BNitric oxide synthase, brain1.14.13.390.631
3pneH4BNitric oxide synthase, brain1.14.13.390.628
3nlqH4BNitric oxide synthase, brain1.14.13.390.626
3uftH4BNitric oxide synthase, brain1.14.13.390.626
4cx5H4BNitric oxide synthase, brain1.14.13.390.626
3nloH4BNitric oxide synthase, brain1.14.13.390.624
3ufvH4BNitric oxide synthase, brain1.14.13.390.623
3ufsH4BNitric oxide synthase, brain1.14.13.390.618
4cx4H4BNitric oxide synthase, brain1.14.13.390.618
3nlzH4BNitric oxide synthase, brain1.14.13.390.614
3nlyH4BNitric oxide synthase, brain1.14.13.390.613
3jwtH4BNitric oxide synthase, brain1.14.13.390.609
4luxH4BNitric oxide synthase, brain1.14.13.390.606
4jsfH4BNitric oxide synthase, brain1.14.13.390.605
5aglH4BNitric oxide synthase, brain1.14.13.390.605
3pngH4BNitric oxide synthase, brain1.14.13.390.603
4imtH4BNitric oxide synthase, brain1.14.13.390.598
4k5gH4BNitric oxide synthase, brain1.14.13.390.594
3rqjH4BNitric oxide synthase, brain1.14.13.390.593
3rqlH4BNitric oxide synthase, brain1.14.13.390.593
4k5eH4BNitric oxide synthase, brain1.14.13.390.593
3jx6H4BNitric oxide synthase, brain1.14.13.390.592
3jwuH4BNitric oxide synthase, brain1.14.13.390.588
3ufwHW0Nitric oxide synthase, brain1.14.13.390.586
3ufuH4BNitric oxide synthase, brain1.14.13.390.585
3rqmH4BNitric oxide synthase, brain1.14.13.390.582
3pnfH4BNitric oxide synthase, brain1.14.13.390.578
3n5wXFJNitric oxide synthase, brain1.14.13.390.576
4imwH4BNitric oxide synthase, brain1.14.13.390.576
3jx3H4BNitric oxide synthase, brain1.14.13.390.575
3nlkH4BNitric oxide synthase, brain1.14.13.390.573
3nlqJRRNitric oxide synthase, brain1.14.13.390.572
1zzqH4BNitric oxide synthase, brain1.14.13.390.571
4cx3H4BNitric oxide synthase, brain1.14.13.390.571
3n61H4BNitric oxide synthase, brain1.14.13.390.570
1p6kH4BNitric oxide synthase, brain1.14.13.390.569
4imuH4BNitric oxide synthase, brain1.14.13.390.567
1om5H4BNitric oxide synthase, brain1.14.13.390.560
4jsgH4BNitric oxide synthase, brain1.14.13.390.560
4cx4HW9Nitric oxide synthase, brain1.14.13.390.559
3n5xXFKNitric oxide synthase, brain1.14.13.390.558
3nlvH4BNitric oxide synthase, brain1.14.13.390.558
3tylH4BNitric oxide synthase, brain1.14.13.390.556
3tymH4BNitric oxide synthase, brain1.14.13.390.556
4k5fH4BNitric oxide synthase, brain1.14.13.390.556
4fw0H4BNitric oxide synthase, brain1.14.13.390.555
3b3oH4BNitric oxide synthase, brain1.14.13.390.554
3jx3JI5Nitric oxide synthase, brain1.14.13.390.554
1m00H4BNitric oxide synthase, brain1.14.13.390.553
3nny59RNitric oxide synthase, brain1.14.13.390.553
3nnzH4BNitric oxide synthase, brain1.14.13.390.553
4jseH4BNitric oxide synthase, brain1.14.13.390.552
3jt4H4BNitric oxide synthase, brain1.14.13.390.551
3n62XFJNitric oxide synthase, brain1.14.13.390.551
3svpH4BNitric oxide synthase, brain1.14.13.390.551
3b3mH4BNitric oxide synthase, brain1.14.13.390.550
3n5yH4BNitric oxide synthase, brain1.14.13.390.549
1k2uH4BNitric oxide synthase, brain1.14.13.390.548
3ufsHW6Nitric oxide synthase, brain1.14.13.390.548
3pne8AXNitric oxide synthase, brain1.14.13.390.547
3b3pH4BNitric oxide synthase, brain1.14.13.390.546
3dqrH4BNitric oxide synthase, brain1.14.13.390.546
3svqJK4Nitric oxide synthase, brain1.14.13.390.546
3ufqH4BNitric oxide synthase, brain1.14.13.390.544
2hx4H4BNitric oxide synthase, brain1.14.13.390.543
3ufpH4BNitric oxide synthase, brain1.14.13.390.542
3nljH4BNitric oxide synthase, brain1.14.13.390.540
4jsfQJ4Nitric oxide synthase, brain1.14.13.390.539
4jsiH4BNitric oxide synthase, brain1.14.13.390.539
3n65XFJNitric oxide synthase, brain1.14.13.390.538
3rqlX2DNitric oxide synthase, brain1.14.13.390.538
1rs6H4BNitric oxide synthase, brain1.14.13.390.537
3n5vH4BNitric oxide synthase, brain1.14.13.390.535
4fvzH4BNitric oxide synthase, brain1.14.13.390.535
3q99H4BNitric oxide synthase, brain1.14.13.390.534
4k5dH4BNitric oxide synthase, brain1.14.13.390.534
1zzuH4BNitric oxide synthase, brain1.14.13.390.532
3b3nH4BNitric oxide synthase, brain1.14.13.390.532
3jwvH4BNitric oxide synthase, brain1.14.13.390.532
3ufrH4BNitric oxide synthase, brain1.14.13.390.531
1p6jH4BNitric oxide synthase, brain1.14.13.390.530
3nloJSRNitric oxide synthase, brain1.14.13.390.530
3jt8H4BNitric oxide synthase, brain1.14.13.390.529
1k2tH4BNitric oxide synthase, brain1.14.13.390.528
3jwtJI5Nitric oxide synthase, brain1.14.13.390.528
3nlnH4BNitric oxide synthase, brain1.14.13.390.528
3nlpH4BNitric oxide synthase, brain1.14.13.390.528
3ufvHW9Nitric oxide synthase, brain1.14.13.390.527
4fvyH4BNitric oxide synthase, brain1.14.13.390.527
1zzrH4BNitric oxide synthase, brain1.14.13.390.526
3n5zH4BNitric oxide synthase, brain1.14.13.390.526
3nlz3XDNitric oxide synthase, brain1.14.13.390.522
4euxHW1Nitric oxide synthase, brain1.14.13.390.522
3n60XFNNitric oxide synthase, brain1.14.13.390.516
3n61XFJNitric oxide synthase, brain1.14.13.390.516
3nly3XCNitric oxide synthase, brain1.14.13.390.516
3q9aH4BNitric oxide synthase, brain1.14.13.390.516
3nnz59WNitric oxide synthase, brain1.14.13.390.515
4imt1EWNitric oxide synthase, brain1.14.13.390.515
3fc5H4BNitric oxide synthase, brain1.14.13.390.514
3jt9H4BNitric oxide synthase, brain1.14.13.390.514
2g6iHBINitric oxide synthase, brain1.14.13.390.512
3jt5H4BNitric oxide synthase, brain1.14.13.390.512
4k5gQ13Nitric oxide synthase, brain1.14.13.390.512
3png8CXNitric oxide synthase, brain1.14.13.390.511
4imw1EVNitric oxide synthase, brain1.14.13.390.511
4luxQJ8Nitric oxide synthase, brain1.14.13.390.510
3jx2H4BNitric oxide synthase, brain1.14.13.390.509
4fvxH4BNitric oxide synthase, brain1.14.13.390.509
3svpJK5Nitric oxide synthase, brain1.14.13.390.508
3b3oJI3Nitric oxide synthase, brain1.14.13.390.507
3n63XFNNitric oxide synthase, brain1.14.13.390.507
3ufuHW8Nitric oxide synthase, brain1.14.13.390.507
5agpH4BNitric oxide synthase, brain1.14.13.390.507
1rs7H4BNitric oxide synthase, brain1.14.13.390.506
4cx3HW8Nitric oxide synthase, brain1.14.13.390.506
3jx5H4BNitric oxide synthase, brain1.14.13.390.505
3jt7H4BNitric oxide synthase, brain1.14.13.390.501
3rqjY2BNitric oxide synthase, brain1.14.13.390.500
3jtaH4BNitric oxide synthase, brain1.14.13.390.499
3jx4H4BNitric oxide synthase, brain1.14.13.390.498
3rqmX2ENitric oxide synthase, brain1.14.13.390.498
3pnf8BXNitric oxide synthase, brain1.14.13.390.495
4imu1ETNitric oxide synthase, brain1.14.13.390.495
4cx5HW8Nitric oxide synthase, brain1.14.13.390.492
1zzqDP9Nitric oxide synthase, brain1.14.13.390.491
4k5fQ14Nitric oxide synthase, brain1.14.13.390.490
1mmvH4BNitric oxide synthase, brain1.14.13.390.489
3jwuJ11Nitric oxide synthase, brain1.14.13.390.488
1r35H4BNitric oxide synthase, inducible1.14.13.390.487
3uftHW7Nitric oxide synthase, brain1.14.13.390.487
5agkH4BNitric oxide synthase, brain1.14.13.390.485
3nlkJSSNitric oxide synthase, brain1.14.13.390.484
1zzuDP1Nitric oxide synthase, brain1.14.13.390.482
3jt6H4BNitric oxide synthase, brain1.14.13.390.482
3n5yXFLNitric oxide synthase, brain1.14.13.390.481
3jt3H4BNitric oxide synthase, brain1.14.13.390.479
3e7gH4BNitric oxide synthase, inducible1.14.13.390.477
3n66XFNNitric oxide synthase, brain1.14.13.390.477
2hx44HXNitric oxide synthase, brain1.14.13.390.476
3nlv3XANitric oxide synthase, brain1.14.13.390.476
3tym08RNitric oxide synthase, brain1.14.13.390.474
3ufpH4WNitric oxide synthase, brain1.14.13.390.473
2g6j7APNitric oxide synthase, brain1.14.13.390.472
1zzrDP9Nitric oxide synthase, brain1.14.13.390.471
4jsgQ10Nitric oxide synthase, brain1.14.13.390.468
4k5e1Q7Nitric oxide synthase, brain1.14.13.390.468
4k5d1Q6Nitric oxide synthase, brain1.14.13.390.467
1m8eH4BNitric oxide synthase, inducible1.14.13.390.466
3dwjH4BNitric oxide synthase, inducible1.14.13.390.466
3jx0JI4Nitric oxide synthase, brain1.14.13.390.464
3nljJRRNitric oxide synthase, brain1.14.13.390.464
1zvlH4BNitric oxide synthase, brain1.14.13.390.463
3b3pJI7Nitric oxide synthase, brain1.14.13.390.463
3jwsJI4Nitric oxide synthase, brain1.14.13.390.463
3ufrH5WNitric oxide synthase, brain1.14.13.390.461
3e6tH4BNitric oxide synthase, inducible1.14.13.390.460
3jx6JI5Nitric oxide synthase, brain1.14.13.390.460
3nlrH4BNitric oxide synthase, brain1.14.13.390.460
3e6oH4BNitric oxide synthase, inducible1.14.13.390.459
3nlw3XFNitric oxide synthase, brain1.14.13.390.458
3tylAXWNitric oxide synthase, brain1.14.13.390.457
1qomH4BNitric oxide synthase, inducible1.14.13.390.456
3jx2JI4Nitric oxide synthase, brain1.14.13.390.456
3nlnJRSNitric oxide synthase, brain1.14.13.390.454
3ufqHW5Nitric oxide synthase, brain1.14.13.390.454
2nodH4BNitric oxide synthase, inducible1.14.13.390.453
1p6jDP9Nitric oxide synthase, brain1.14.13.390.452
3nosH4BNitric oxide synthase, endothelial1.14.13.390.451
4jsiQ05Nitric oxide synthase, brain1.14.13.390.450
3ufoHW4Nitric oxide synthase, brain1.14.13.390.449
3n5vXFHNitric oxide synthase, brain1.14.13.390.448
3nw2H4BNitric oxide synthase, inducible1.14.13.390.447
3n5zXFMNitric oxide synthase, brain1.14.13.390.446
2hx3H4BNitric oxide synthase, brain1.14.13.390.444
3jx4J11Nitric oxide synthase, brain1.14.13.390.444
3nlpJSSNitric oxide synthase, brain1.14.13.390.444
1rs6DP2Nitric oxide synthase, brain1.14.13.390.442
4d1oH4BNitric oxide synthase, endothelial1.14.13.390.442
3hsnH4BNitric oxide synthase, brain1.14.13.390.440