Cavities are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
3rkr | NAP | Uncharacterized protein |
PDB ID | HET | Uniprot Name | EC Number | Cavity Similarity |
Align |
---|---|---|---|---|---|
3rkr | NAP | Uncharacterized protein | / | 1.000 | |
2hrb | NAP | Carbonyl reductase [NADPH] 3 | 1.1.1.184 | 0.487 | |
1ae1 | NAP | Tropinone reductase 1 | / | 0.470 | |
3gy0 | NAP | NAD(P)-dependent oxidoreductase | / | 0.452 | |
4j7x | NAP | Sepiapterin reductase | 1.1.1.153 | 0.448 | |
4qed | NAP | ElxO | / | 0.446 | |
4bmv | NAP | Short-chain dehydrogenase | / | 0.445 | |
4j7u | NAP | Sepiapterin reductase | 1.1.1.153 | 0.445 | |
1xg5 | NAP | Dehydrogenase/reductase SDR family member 11 | / | 0.441 | |
4dmm | NAP | 3-oxoacyl-[acyl-carrier-protein] reductase | / | 0.441 |