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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3r7mSUZAldo-keto reductase family 1 member C3

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
3r7mSUZAldo-keto reductase family 1 member C3/1.000
3r94FLRAldo-keto reductase family 1 member C3/0.631
3r43ID8Aldo-keto reductase family 1 member C3/0.625
3uweVJJAldo-keto reductase family 1 member C3/0.608
1s2cFLFAldo-keto reductase family 1 member C3/0.591
4hmn16JAldo-keto reductase family 1 member C3/0.585
4dbs0HVAldo-keto reductase family 1 member C3/0.572
1zq5E04Aldo-keto reductase family 1 member C3/0.569
3r6iJMSAldo-keto reductase family 1 member C3/0.566
3r8gIZPAldo-keto reductase family 1 member C3/0.557
4h7c10HAldo-keto reductase family 1 member C3/0.537
2f3815MAldo-keto reductase family 1 member C3/0.536
4fam0SZAldo-keto reductase family 1 member C3/0.532
4dbuBT9Aldo-keto reductase family 1 member C3/0.525
3r58NPSAldo-keto reductase family 1 member C3/0.516
3r8hZOMAldo-keto reductase family 1 member C3/0.493
1ry0PG2Aldo-keto reductase family 1 member C3/0.491
4dbw511Aldo-keto reductase family 1 member C3/0.479
4fa30SLAldo-keto reductase family 1 member C3/0.464
4fal0T0Aldo-keto reductase family 1 member C3/0.451
3ug8IMNAldo-keto reductase family 1 member C3/0.448
1ry8RUTAldo-keto reductase family 1 member C3/0.443