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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
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Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3qvtNAIMyo-inositol-1-phosphate synthase (Ino1)

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
3qvtNAIMyo-inositol-1-phosphate synthase (Ino1)/1.000
3qvxNADMyo-inositol-1-phosphate synthase (Ino1)/0.722
3qw2NADMyo-inositol-1-phosphate synthase (Ino1)/0.585
3qvwNADMyo-inositol-1-phosphate synthase (Ino1)/0.556
3qvsNADMyo-inositol-1-phosphate synthase (Ino1)/0.486
1u1iNADMyo-inositol-1-phosphate synthase (Ino1)/0.463