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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3qu0X40Cyclin-dependent kinase 22.7.11.22

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
3qu0X40Cyclin-dependent kinase 22.7.11.221.000
3rk909ZCyclin-dependent kinase 22.7.11.220.618
3rpv26ZCyclin-dependent kinase 22.7.11.220.588
3rk708ZCyclin-dependent kinase 22.7.11.220.569
3lfnA27Cyclin-dependent kinase 22.7.11.220.565
3qwjX6ACyclin-dependent kinase 22.7.11.220.563
3qtzX42Cyclin-dependent kinase 22.7.11.220.561
3rjc06ZCyclin-dependent kinase 22.7.11.220.561
2b52D42Cyclin-dependent kinase 22.7.11.220.554
2xmyCDKCyclin-dependent kinase 22.7.11.220.550
2c6o4SPCyclin-dependent kinase 22.7.11.220.547
4fkr45KCyclin-dependent kinase 22.7.11.220.542
4ek816KCyclin-dependent kinase 22.7.11.220.539
3r8vZ62Cyclin-dependent kinase 22.7.11.220.537
3rkb12ZCyclin-dependent kinase 22.7.11.220.536
3qtuX44Cyclin-dependent kinase 22.7.11.220.534
3rpo24ZCyclin-dependent kinase 22.7.11.220.529
4fkv61KCyclin-dependent kinase 22.7.11.220.526
3rak03ZCyclin-dependent kinase 22.7.11.220.525
1pxmCK5Cyclin-dependent kinase 22.7.11.220.524
1g5sI17Cyclin-dependent kinase 22.7.11.220.522
1y91CT9Cyclin-dependent kinase 22.7.11.220.522
2a0cCK9Cyclin-dependent kinase 22.7.11.220.522
3r1yX76Cyclin-dependent kinase 22.7.11.220.522
4fki09KCyclin-dependent kinase 22.7.11.220.522
3unj0BXCyclin-dependent kinase 22.7.11.220.521
1ke5LS1Cyclin-dependent kinase 22.7.11.220.518
3rni21ZCyclin-dependent kinase 22.7.11.220.518
3r71X86Cyclin-dependent kinase 22.7.11.220.517
3roy22ZCyclin-dependent kinase 22.7.11.220.517
3r8lZ30Cyclin-dependent kinase 22.7.11.220.516
3qzgX67Cyclin-dependent kinase 22.7.11.220.515
3s1h56ZCyclin-dependent kinase 22.7.11.220.513
3rm618ZCyclin-dependent kinase 22.7.11.220.512
1ykr628Cyclin-dependent kinase 22.7.11.220.510
2w06FRVCyclin-dependent kinase 22.7.11.220.509
2btrU73Cyclin-dependent kinase 22.7.11.220.508
3qxoX65Cyclin-dependent kinase 22.7.11.220.508
1oitHDTCyclin-dependent kinase 22.7.11.220.507
3iggEFQCyclin-dependent kinase 22.7.11.220.505
1ckpPVBCyclin-dependent kinase 22.7.11.220.504
1pxlCK4Cyclin-dependent kinase 22.7.11.220.504
3qtxX43Cyclin-dependent kinase 22.7.11.220.504
3rmf20ZCyclin-dependent kinase 22.7.11.220.504
4fkq42KCyclin-dependent kinase 22.7.11.220.504
3rk507ZCyclin-dependent kinase 22.7.11.220.503
1w0xOLOCyclin-dependent kinase 22.7.11.220.501
3qx2X63Cyclin-dependent kinase 22.7.11.220.499
4fkt48KCyclin-dependent kinase 22.7.11.220.499
3r7yZ04Cyclin-dependent kinase 22.7.11.220.498
2btsU32Cyclin-dependent kinase 22.7.11.220.497
3sqq99ZCyclin-dependent kinase 22.7.11.220.497
3qzhX69Cyclin-dependent kinase 22.7.11.220.496
3r83Z14Cyclin-dependent kinase 22.7.11.220.496
1ke6LS2Cyclin-dependent kinase 22.7.11.220.495
2vtiLZ3Cyclin-dependent kinase 22.7.11.220.495
3s2pPMUCyclin-dependent kinase 22.7.11.220.494
3ti1B49Cyclin-dependent kinase 22.7.11.220.491
4acm7YGCyclin-dependent kinase 22.7.11.220.490
1gih1PUCyclin-dependent kinase 22.7.11.220.489
3sw418KCyclin-dependent kinase 22.7.11.220.489
4ek610KCyclin-dependent kinase 22.7.11.220.489
4bgh3I6Cyclin-dependent kinase 22.7.11.220.487
4fkg4CKCyclin-dependent kinase 22.7.11.220.487
2vtoLZ8Cyclin-dependent kinase 22.7.11.220.485
1oiyN41Cyclin-dependent kinase 22.7.11.220.484
1pxoCK7Cyclin-dependent kinase 22.7.11.220.484
1urwI1PCyclin-dependent kinase 22.7.11.220.483
2exmZIPCyclin-dependent kinase 22.7.11.220.483
2a4lRRCCyclin-dependent kinase 22.7.11.220.482
3lfqA28Cyclin-dependent kinase 22.7.11.220.482
1aq1STUCyclin-dependent kinase 22.7.11.220.481
1ke9LS5Cyclin-dependent kinase 22.7.11.220.481
4fkpLS5Cyclin-dependent kinase 22.7.11.220.481
4lyn1YGCyclin-dependent kinase 22.7.11.220.481
1b38ATPCyclin-dependent kinase 22.7.11.220.480
2uzoC62Cyclin-dependent kinase 22.7.11.220.480
3py0SU9Cyclin-dependent kinase 22.7.11.220.480
3r6xX84Cyclin-dependent kinase 22.7.11.220.480
4fkj11KCyclin-dependent kinase 22.7.11.220.479
4fks46KCyclin-dependent kinase 22.7.11.220.479
2vv9IM9Cyclin-dependent kinase 22.7.11.220.477
3raiX85Cyclin-dependent kinase 22.7.11.220.477
1h1s4SPCyclin-dependent kinase 22.7.11.220.476
3ral04ZCyclin-dependent kinase 22.7.11.220.476
3unk0BYCyclin-dependent kinase 22.7.11.220.476
1oirHDYCyclin-dependent kinase 22.7.11.220.475
2r3lSCWCyclin-dependent kinase 22.7.11.220.474
3ezvEZVCyclin-dependent kinase 22.7.11.220.474
3qwkX62Cyclin-dependent kinase 22.7.11.220.474
1oguST8Cyclin-dependent kinase 22.7.11.220.473
2r3kSCQCyclin-dependent kinase 22.7.11.220.473
3fz1B98Cyclin-dependent kinase 22.7.11.220.473
3r1sX73Cyclin-dependent kinase 22.7.11.220.472
3r9oZ71Cyclin-dependent kinase 22.7.11.220.472
3r73X87Cyclin-dependent kinase 22.7.11.220.471
3r9hZ67Cyclin-dependent kinase 22.7.11.220.471
4fkw62KCyclin-dependent kinase 22.7.11.220.471
1e1xNW1Cyclin-dependent kinase 22.7.11.220.470
1ke8LS4Cyclin-dependent kinase 22.7.11.220.470
3rpy27ZCyclin-dependent kinase 22.7.11.220.470
4ez30S0Cyclin-dependent kinase 22.7.11.220.470
1ke7LS3Cyclin-dependent kinase 22.7.11.220.469
2duv371Cyclin-dependent kinase 22.7.11.220.468
3ql8X01Cyclin-dependent kinase 22.7.11.220.467
3qtrX36Cyclin-dependent kinase 22.7.11.220.467
1vyzN5BCyclin-dependent kinase 22.7.11.220.466
2iw84SPCyclin-dependent kinase 22.7.11.220.466
3ddpRC8Cyclin-dependent kinase 22.7.11.220.466
3qqfX07Cyclin-dependent kinase 22.7.11.220.466
1oi9N20Cyclin-dependent kinase 22.7.11.220.465
1w8cN69Cyclin-dependent kinase 22.7.11.220.464
2w17I19Cyclin-dependent kinase 22.7.11.220.464
3ig7EFPCyclin-dependent kinase 22.7.11.220.464
1h1r6CPCyclin-dependent kinase 22.7.11.220.463
2r3jSCJCyclin-dependent kinase 22.7.11.220.463
3qqkX02Cyclin-dependent kinase 22.7.11.220.463
3r1qX75Cyclin-dependent kinase 22.7.11.220.463
3ddqRRCCyclin-dependent kinase 22.7.11.220.461
3r28XA0Cyclin-dependent kinase 22.7.11.220.461
3s0o50ZCyclin-dependent kinase 22.7.11.220.461
2uznC96Cyclin-dependent kinase 22.7.11.220.458
3qqlX03Cyclin-dependent kinase 22.7.11.220.457
4kd11QKCyclin-dependent kinase 22.7.11.220.457
1v1k3FPCyclin-dependent kinase 22.7.11.220.456
2c6kDT2Cyclin-dependent kinase 22.7.11.220.456
2w1hL0FCyclin-dependent kinase 22.7.11.220.456
4eon1ROCyclin-dependent kinase 22.7.11.220.456
4fko20KCyclin-dependent kinase 22.7.11.220.456
1p2a5BNCyclin-dependent kinase 22.7.11.220.455
2vtjLZ4Cyclin-dependent kinase 22.7.11.220.455
3ezrEZRCyclin-dependent kinase 22.7.11.220.455
2vtsLZCCyclin-dependent kinase 22.7.11.220.454
4eor4SPCyclin-dependent kinase 22.7.11.220.453
1di8DTQCyclin-dependent kinase 22.7.11.220.452
3qqhX0ACyclin-dependent kinase 22.7.11.220.452
1fvv107Cyclin-dependent kinase 22.7.11.220.451
1h0w207Cyclin-dependent kinase 22.7.11.220.451
4fx360KCyclin-dependent kinase 22.7.11.220.451
1oiuN76Cyclin-dependent kinase 22.7.11.220.447
2vtnLZ7Cyclin-dependent kinase 22.7.11.220.447
1fvt106Cyclin-dependent kinase 22.7.11.220.446
2b53D23Cyclin-dependent kinase 22.7.11.220.446
2iw94SPCyclin-dependent kinase 22.7.11.220.445
2wxvWXVCyclin-dependent kinase 22.7.11.220.445
3pj8404Cyclin-dependent kinase 22.7.11.220.445
3qruX19Cyclin-dependent kinase 22.7.11.220.445
4eos1ROCyclin-dependent kinase 22.7.11.220.445
1y8yCT7Cyclin-dependent kinase 22.7.11.220.444
3rahO1ZCyclin-dependent kinase 22.7.11.220.444
3sayOFTGlycogen synthase kinase-3 beta2.7.11.260.443
2vtpLZ9Cyclin-dependent kinase 22.7.11.220.442
3sw719KCyclin-dependent kinase 22.7.11.220.442
1gii1PUCyclin-dependent kinase 22.7.11.220.441
1hckATPCyclin-dependent kinase 22.7.11.220.441