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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
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Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3pe2E1BCasein kinase II subunit alpha2.7.11.1

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
3pe2E1BCasein kinase II subunit alpha2.7.11.11.000
3mb714ICasein kinase II subunit alpha2.7.11.10.602
3ofm4B0Casein kinase II subunit alpha'2.7.11.10.541
3q9xEMOCasein kinase II subunit alpha2.7.11.10.527
5cvfATPCasein kinase II subunit alpha2.7.11.10.511
1m2pHNACasein kinase II subunit alpha2.7.11.10.507
3be9P04Casein kinase II subunit alpha2.7.11.10.506
4grb0XGCasein kinase II subunit alpha2.7.11.10.505
2pvlP55Casein kinase II subunit alpha2.7.11.10.491
4dgnLU2Casein kinase II subunit alpha2.7.11.10.491
2zjwREFCasein kinase II subunit alpha2.7.11.10.487
4anmWULCasein kinase II subunit alpha2.7.11.10.487
4dgmAGICasein kinase II subunit alpha2.7.11.10.487
2pvmP29Casein kinase II subunit alpha2.7.11.10.483
5av3KMPDeath-associated protein kinase 12.7.11.10.476
3at4CCKCasein kinase II subunit alpha2.7.11.10.475
3u4uLNHCasein kinase II subunit alpha2.7.11.10.474
2pvhP19Casein kinase II subunit alpha2.7.11.10.471
3axwTIDCasein kinase II subunit alpha2.7.11.10.467
5av2KMPDeath-associated protein kinase 12.7.11.10.462
4mq12C3Dual specificity tyrosine-phosphorylation-regulated kinase 1A2.7.12.10.461
3juhANPCasein kinase II subunit alpha2.7.11.10.458
2yaaATPDeath-associated protein kinase 2/0.457
1om1IQACasein kinase II subunit alpha2.7.11.10.456
1jklANPDeath-associated protein kinase 12.7.11.10.450
1pjkANPCasein kinase II subunit alpha2.7.11.10.450
2pvjP44Casein kinase II subunit alpha2.7.11.10.450
3qxpX64Cyclin-dependent kinase 22.7.11.220.450
4fsuHK5Serine/threonine-protein kinase Chk12.7.11.10.449
2fvdLIACyclin-dependent kinase 22.7.11.220.446
3orzBI43-phosphoinositide-dependent protein kinase 12.7.11.10.446
3c0g3AMPeripheral plasma membrane protein CASK2.7.11.10.443
2vu3LZECyclin-dependent kinase 22.7.11.220.441