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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3oewNADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.9

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
3oewNADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.91.000
3of2NADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.862
3oeyNADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.756
4dreNAIEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.679
4dtiNAIEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.671
2aq8NAIEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.611
2aqhNAIEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.609
1enyNADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.589
4biiPYWEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.557
4dquNAIEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.551
1zidZIDEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.544
4bgePYWEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.542
1bvrNADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.541
4bgiI4IEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.530
1enzNADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.522
2idzZIDEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.520
4bqpNADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.520
2ie0ZIDEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.496
2iebZIDEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.476
3uicNADEnoyl-[acyl-carrier-protein] reductase [NADH]/0.476
1mkdZARcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.449