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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3o3rNAPAldose reductase-related protein 11.1.1.21

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
3o3rNAPAldose reductase-related protein 11.1.1.211.000
2j8tNAPAldose reductase1.1.1.210.531
2acqNAPAldose reductase1.1.1.210.528
2acsNAPAldose reductase1.1.1.210.515
2iq0NAPAldose reductase1.1.1.210.515
1x96NAPAldose reductase1.1.1.210.509
3v36NAPAldose reductase1.1.1.210.507
1x98NAPAldose reductase1.1.1.210.505
1z8aNAPAldose reductase1.1.1.210.495
3q67NAPAldose reductase1.1.1.210.490
1az2NAPAldose reductase1.1.1.210.489
2pfhNDPAldose reductase1.1.1.210.489
3h7uNAPNADPH-dependent aldo-keto reductase, chloroplastic/0.487
1ah4NAPAldose reductase1.1.1.210.486
2pf8NDPAldose reductase1.1.1.210.486
3q65NAPAldose reductase1.1.1.210.481
4xo7NAPAldo-keto reductase family 1 member C2/0.477
2acuNAPAldose reductase1.1.1.210.474
1adsNAPAldose reductase1.1.1.210.473
2pevNDPAldose reductase1.1.1.210.472
3qkzNAPAldose reductase-related protein 11.1.1.210.468
4jtqNAPAldo-keto reductase family 1 member C2/0.468
2hdjNDPAldo-keto reductase family 1 member C2/0.459
3g1rNAP3-oxo-5-beta-steroid 4-dehydrogenase/0.456
1c9wNAPAldose reductase-related protein 2/0.448
4l1xNAPAldo-keto reductase family 1 member C2/0.441