Cavities are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
3ny9 | JSZ | Beta-2 adrenergic receptor |
PDB ID | HET | Uniprot Name | EC Number | Cavity Similarity |
Align |
---|---|---|---|---|---|
3ny9 | JSZ | Beta-2 adrenergic receptor | / | 1.000 | |
3d4s | TIM | Beta-2 adrenergic receptor | / | 0.579 | |
5jqh | CAU | Beta-2 adrenergic receptor | / | 0.548 | |
5d6l | CAU | Beta-2 adrenergic receptor | / | 0.545 | |
2rh1 | CAU | Beta-2 adrenergic receptor | / | 0.535 | |
5d5b | CAU | Beta-2 adrenergic receptor | / | 0.524 | |
5d5a | CAU | Beta-2 adrenergic receptor | / | 0.518 | |
3nya | JTZ | Beta-2 adrenergic receptor | / | 0.517 | |
4gbr | CAU | Beta-2 adrenergic receptor | / | 0.500 |