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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3nrcTCLEnoyl-[acyl-carrier-protein] reductase [NADH]

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
3nrcTCLEnoyl-[acyl-carrier-protein] reductase [NADH]/1.000
3uic09TEnoyl-[acyl-carrier-protein] reductase [NADH]/0.611
5cp8TCUEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.521
5coqTCUEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.482
3fnhJPJEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.481
2b35TCLEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.472
3fnfJPMEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.455
2o2yTCLEnoyl-ACP reductase/0.452
3am4FT1Enoyl-ACP reductase/0.448
4m87NADEnoyl-[acyl-carrier-protein] reductase [NADH]/0.446
1zsnTN2Enoyl-ACP reductase/0.442