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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3nlqH4BNitric oxide synthase, brain1.14.13.39

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity
Align
3nlqH4BNitric oxide synthase, brain1.14.13.391.000
3nlqJRRNitric oxide synthase, brain1.14.13.390.814
4cx5H4BNitric oxide synthase, brain1.14.13.390.735
4euxH4BNitric oxide synthase, brain1.14.13.390.724
4cx4H4BNitric oxide synthase, brain1.14.13.390.720
3nnyH4BNitric oxide synthase, brain1.14.13.390.707
1zzuH4BNitric oxide synthase, brain1.14.13.390.686
5aglH4BNitric oxide synthase, brain1.14.13.390.668
3rqlH4BNitric oxide synthase, brain1.14.13.390.658
3pneH4BNitric oxide synthase, brain1.14.13.390.655
3nlwH4BNitric oxide synthase, brain1.14.13.390.654
3ufoH4BNitric oxide synthase, brain1.14.13.390.652
2hx3H4BNitric oxide synthase, brain1.14.13.390.645
3jx6H4BNitric oxide synthase, brain1.14.13.390.644
4jsfH4BNitric oxide synthase, brain1.14.13.390.640
3jx3H4BNitric oxide synthase, brain1.14.13.390.638
3rqkH4BNitric oxide synthase, brain1.14.13.390.636
3ufwH4BNitric oxide synthase, brain1.14.13.390.632
4gqeH4BNitric oxide synthase, brain1.14.13.390.629
4cx4HW9Nitric oxide synthase, brain1.14.13.390.627
4cx3H4BNitric oxide synthase, brain1.14.13.390.621
3svqH4BNitric oxide synthase, brain1.14.13.390.619
3nlyH4BNitric oxide synthase, brain1.14.13.390.614
3nlrH4BNitric oxide synthase, brain1.14.13.390.611
3n61H4BNitric oxide synthase, brain1.14.13.390.610
3nloH4BNitric oxide synthase, brain1.14.13.390.604
3ufsH4BNitric oxide synthase, brain1.14.13.390.603
4luxH4BNitric oxide synthase, brain1.14.13.390.602
3nlkH4BNitric oxide synthase, brain1.14.13.390.599
4imtH4BNitric oxide synthase, brain1.14.13.390.599
4imwH4BNitric oxide synthase, brain1.14.13.390.599
3nny59RNitric oxide synthase, brain1.14.13.390.597
3n63XFNNitric oxide synthase, brain1.14.13.390.596
3ufpH4BNitric oxide synthase, brain1.14.13.390.596
3pnfH4BNitric oxide synthase, brain1.14.13.390.595
3nlzH4BNitric oxide synthase, brain1.14.13.390.593
3rqmH4BNitric oxide synthase, brain1.14.13.390.593
2hx44HXNitric oxide synthase, brain1.14.13.390.592
3pngH4BNitric oxide synthase, brain1.14.13.390.592
3ufvH4BNitric oxide synthase, brain1.14.13.390.592
3dqrH4BNitric oxide synthase, brain1.14.13.390.591
3ufuH4BNitric oxide synthase, brain1.14.13.390.591
4k5gH4BNitric oxide synthase, brain1.14.13.390.590
3jwuH4BNitric oxide synthase, brain1.14.13.390.589
4k5fH4BNitric oxide synthase, brain1.14.13.390.589
3jx3JI5Nitric oxide synthase, brain1.14.13.390.588
1zzqH4BNitric oxide synthase, brain1.14.13.390.585
3jwtH4BNitric oxide synthase, brain1.14.13.390.585
4jsgH4BNitric oxide synthase, brain1.14.13.390.583
4k5dH4BNitric oxide synthase, brain1.14.13.390.583
1zzrDP9Nitric oxide synthase, brain1.14.13.390.582
3nlpH4BNitric oxide synthase, brain1.14.13.390.580
4jseH4BNitric oxide synthase, brain1.14.13.390.578
3rqjH4BNitric oxide synthase, brain1.14.13.390.574
1p6kH4BNitric oxide synthase, brain1.14.13.390.570
3tylH4BNitric oxide synthase, brain1.14.13.390.570
4k5eH4BNitric oxide synthase, brain1.14.13.390.570
1zzuDP1Nitric oxide synthase, brain1.14.13.390.569
3nnzH4BNitric oxide synthase, brain1.14.13.390.569
3jt6H4BNitric oxide synthase, brain1.14.13.390.568
3jx5H4BNitric oxide synthase, brain1.14.13.390.565
3b3oJI3Nitric oxide synthase, brain1.14.13.390.564
3svpH4BNitric oxide synthase, brain1.14.13.390.564
3n5yH4BNitric oxide synthase, brain1.14.13.390.562
3nljH4BNitric oxide synthase, brain1.14.13.390.562
3ufrH4BNitric oxide synthase, brain1.14.13.390.562
3nlnH4BNitric oxide synthase, brain1.14.13.390.561
3b3pH4BNitric oxide synthase, brain1.14.13.390.560
3ufwHW0Nitric oxide synthase, brain1.14.13.390.560
4jsiH4BNitric oxide synthase, brain1.14.13.390.560
1k2uH4BNitric oxide synthase, brain1.14.13.390.559
4jsfQJ4Nitric oxide synthase, brain1.14.13.390.559
3b3oH4BNitric oxide synthase, brain1.14.13.390.558
3nlvH4BNitric oxide synthase, brain1.14.13.390.558
3n5vH4BNitric oxide synthase, brain1.14.13.390.557
3n5zH4BNitric oxide synthase, brain1.14.13.390.557
3pne8AXNitric oxide synthase, brain1.14.13.390.557
3tymH4BNitric oxide synthase, brain1.14.13.390.557
3uftH4BNitric oxide synthase, brain1.14.13.390.555
1k2tH4BNitric oxide synthase, brain1.14.13.390.554
3b3nH4BNitric oxide synthase, brain1.14.13.390.553
3jx2H4BNitric oxide synthase, brain1.14.13.390.553
3ufqH4BNitric oxide synthase, brain1.14.13.390.553
1p6jH4BNitric oxide synthase, brain1.14.13.390.552
3jt3H4BNitric oxide synthase, brain1.14.13.390.552
3jwvH4BNitric oxide synthase, brain1.14.13.390.552
4fvzH4BNitric oxide synthase, brain1.14.13.390.551
3b3mH4BNitric oxide synthase, brain1.14.13.390.550
1m00H4BNitric oxide synthase, brain1.14.13.390.546
2hx4H4BNitric oxide synthase, brain1.14.13.390.546
3jx4H4BNitric oxide synthase, brain1.14.13.390.546
3n5wXFJNitric oxide synthase, brain1.14.13.390.546
4imuH4BNitric oxide synthase, brain1.14.13.390.546
1rs7H4BNitric oxide synthase, brain1.14.13.390.545
1zzrH4BNitric oxide synthase, brain1.14.13.390.545
3q99H4BNitric oxide synthase, brain1.14.13.390.545
2g6j7APNitric oxide synthase, brain1.14.13.390.544
4fw0H4BNitric oxide synthase, brain1.14.13.390.544
1rs6H4BNitric oxide synthase, brain1.14.13.390.541
3rqjY2BNitric oxide synthase, brain1.14.13.390.541
4cx3HW8Nitric oxide synthase, brain1.14.13.390.540
3q9aH4BNitric oxide synthase, brain1.14.13.390.539
5agpH4BNitric oxide synthase, brain1.14.13.390.538
3nnz59WNitric oxide synthase, brain1.14.13.390.537
3n62XFJNitric oxide synthase, brain1.14.13.390.536
3n65XFJNitric oxide synthase, brain1.14.13.390.535
5agkH4BNitric oxide synthase, brain1.14.13.390.535
4imt1EWNitric oxide synthase, brain1.14.13.390.531
3jt4H4BNitric oxide synthase, brain1.14.13.390.530
3n60XFNNitric oxide synthase, brain1.14.13.390.526
3nly3XCNitric oxide synthase, brain1.14.13.390.524
3jtaH4BNitric oxide synthase, brain1.14.13.390.522
3n5xXFKNitric oxide synthase, brain1.14.13.390.522
1om5H4BNitric oxide synthase, brain1.14.13.390.520
3fc5H4BNitric oxide synthase, brain1.14.13.390.520
3rqkX2CNitric oxide synthase, brain1.14.13.390.519
3n61XFJNitric oxide synthase, brain1.14.13.390.517
4fvyH4BNitric oxide synthase, brain1.14.13.390.516
3png8CXNitric oxide synthase, brain1.14.13.390.515
4euxHW1Nitric oxide synthase, brain1.14.13.390.515
3rqmX2ENitric oxide synthase, brain1.14.13.390.514
3ufpH4WNitric oxide synthase, brain1.14.13.390.512
3ufuHW8Nitric oxide synthase, brain1.14.13.390.512
1zzqDP9Nitric oxide synthase, brain1.14.13.390.511
3svqJK4Nitric oxide synthase, brain1.14.13.390.509
4k5fQ14Nitric oxide synthase, brain1.14.13.390.509
3pnf8BXNitric oxide synthase, brain1.14.13.390.508
4cx5HW8Nitric oxide synthase, brain1.14.13.390.508
4luxQJ8Nitric oxide synthase, brain1.14.13.390.508
3nlz3XDNitric oxide synthase, brain1.14.13.390.507
3ufsHW6Nitric oxide synthase, brain1.14.13.390.507
3jt8H4BNitric oxide synthase, brain1.14.13.390.505
3jt5H4BNitric oxide synthase, brain1.14.13.390.504
3ufvHW9Nitric oxide synthase, brain1.14.13.390.504
3jt9H4BNitric oxide synthase, brain1.14.13.390.502
3jt7H4BNitric oxide synthase, brain1.14.13.390.501
3svpJK5Nitric oxide synthase, brain1.14.13.390.501
4fvxH4BNitric oxide synthase, brain1.14.13.390.500
3jwtJI5Nitric oxide synthase, brain1.14.13.390.498
4k5gQ13Nitric oxide synthase, brain1.14.13.390.498
1r35H4BNitric oxide synthase, inducible1.14.13.390.497
2g6iHBINitric oxide synthase, brain1.14.13.390.495
3jx6JI5Nitric oxide synthase, brain1.14.13.390.493
3n66XFNNitric oxide synthase, brain1.14.13.390.491
3nlkJSSNitric oxide synthase, brain1.14.13.390.490
3rqlX2DNitric oxide synthase, brain1.14.13.390.489
3ufrH5WNitric oxide synthase, brain1.14.13.390.489
3nljJRRNitric oxide synthase, brain1.14.13.390.487
3jx2JI4Nitric oxide synthase, brain1.14.13.390.485
3nlpJSSNitric oxide synthase, brain1.14.13.390.485
3jx4J11Nitric oxide synthase, brain1.14.13.390.482
3n5zXFMNitric oxide synthase, brain1.14.13.390.482
3nloJSRNitric oxide synthase, brain1.14.13.390.482
4jsgQ10Nitric oxide synthase, brain1.14.13.390.482
3jx0JI4Nitric oxide synthase, brain1.14.13.390.481
3nlnJRSNitric oxide synthase, brain1.14.13.390.480
4imu1ETNitric oxide synthase, brain1.14.13.390.479
1mmvH4BNitric oxide synthase, brain1.14.13.390.478
1p6jDP9Nitric oxide synthase, brain1.14.13.390.477
3nlv3XANitric oxide synthase, brain1.14.13.390.477
3b3pJI7Nitric oxide synthase, brain1.14.13.390.476
3jx5J14Nitric oxide synthase, brain1.14.13.390.476
3nlrJRSNitric oxide synthase, brain1.14.13.390.476
4k5d1Q6Nitric oxide synthase, brain1.14.13.390.476
3dwjH4BNitric oxide synthase, inducible1.14.13.390.475
3tym08RNitric oxide synthase, brain1.14.13.390.474
3nosH4BNitric oxide synthase, endothelial1.14.13.390.473
4d1oH4BNitric oxide synthase, endothelial1.14.13.390.472
3e7gH4BNitric oxide synthase, inducible1.14.13.390.471
3tylAXWNitric oxide synthase, brain1.14.13.390.470
3n5yXFLNitric oxide synthase, brain1.14.13.390.468
3jwsJI4Nitric oxide synthase, brain1.14.13.390.467
3jwuJ11Nitric oxide synthase, brain1.14.13.390.467
3ej8H4BNitric oxide synthase, inducible1.14.13.390.465
4jsiQ05Nitric oxide synthase, brain1.14.13.390.465
3nw2H4BNitric oxide synthase, inducible1.14.13.390.464
3uftHW7Nitric oxide synthase, brain1.14.13.390.464
3e6tH4BNitric oxide synthase, inducible1.14.13.390.463
3ufoHW4Nitric oxide synthase, brain1.14.13.390.462
1zvlH4BNitric oxide synthase, brain1.14.13.390.461
4imw1EVNitric oxide synthase, brain1.14.13.390.459
3n5vXFHNitric oxide synthase, brain1.14.13.390.456
3nlw3XFNitric oxide synthase, brain1.14.13.390.454
4k5e1Q7Nitric oxide synthase, brain1.14.13.390.452
2nodH4BNitric oxide synthase, inducible1.14.13.390.450
3e6oH4BNitric oxide synthase, inducible1.14.13.390.450
1rs6DP2Nitric oxide synthase, brain1.14.13.390.449
4jshQ15Nitric oxide synthase, brain1.14.13.390.446
1qomH4BNitric oxide synthase, inducible1.14.13.390.443