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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3nlkH4BNitric oxide synthase, brain1.14.13.39

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity
Align
3nlkH4BNitric oxide synthase, brain1.14.13.391.000
3jwuH4BNitric oxide synthase, brain1.14.13.390.858
3nlkJSSNitric oxide synthase, brain1.14.13.390.767
3nloH4BNitric oxide synthase, brain1.14.13.390.760
4gqeH4BNitric oxide synthase, brain1.14.13.390.720
3nlwH4BNitric oxide synthase, brain1.14.13.390.712
4k5eH4BNitric oxide synthase, brain1.14.13.390.711
3jwuJ11Nitric oxide synthase, brain1.14.13.390.691
3ufoH4BNitric oxide synthase, brain1.14.13.390.656
3dqrH4BNitric oxide synthase, brain1.14.13.390.651
4cx5H4BNitric oxide synthase, brain1.14.13.390.648
4euxH4BNitric oxide synthase, brain1.14.13.390.647
3n5zH4BNitric oxide synthase, brain1.14.13.390.646
3ufsH4BNitric oxide synthase, brain1.14.13.390.646
5agpH4BNitric oxide synthase, brain1.14.13.390.638
3pneH4BNitric oxide synthase, brain1.14.13.390.628
3ufpH4BNitric oxide synthase, brain1.14.13.390.628
3nlrH4BNitric oxide synthase, brain1.14.13.390.627
3nlnH4BNitric oxide synthase, brain1.14.13.390.625
3nnzH4BNitric oxide synthase, brain1.14.13.390.623
3ufvH4BNitric oxide synthase, brain1.14.13.390.621
4jsgH4BNitric oxide synthase, brain1.14.13.390.617
5agkH4BNitric oxide synthase, brain1.14.13.390.616
3ufqH4BNitric oxide synthase, brain1.14.13.390.613
5aglH4BNitric oxide synthase, brain1.14.13.390.613
2hx3H4BNitric oxide synthase, brain1.14.13.390.612
3nloJSRNitric oxide synthase, brain1.14.13.390.611
3b3pH4BNitric oxide synthase, brain1.14.13.390.608
3nlvH4BNitric oxide synthase, brain1.14.13.390.607
3nlqH4BNitric oxide synthase, brain1.14.13.390.604
3uftH4BNitric oxide synthase, brain1.14.13.390.604
4k5fH4BNitric oxide synthase, brain1.14.13.390.604
3b3oH4BNitric oxide synthase, brain1.14.13.390.603
1p6kH4BNitric oxide synthase, brain1.14.13.390.601
3rqjH4BNitric oxide synthase, brain1.14.13.390.601
3b3mH4BNitric oxide synthase, brain1.14.13.390.600
3tylH4BNitric oxide synthase, brain1.14.13.390.600
4fvzH4BNitric oxide synthase, brain1.14.13.390.598
2hx4H4BNitric oxide synthase, brain1.14.13.390.597
1m00H4BNitric oxide synthase, brain1.14.13.390.596
3jwvH4BNitric oxide synthase, brain1.14.13.390.596
1k2uH4BNitric oxide synthase, brain1.14.13.390.594
3nlpH4BNitric oxide synthase, brain1.14.13.390.593
3nlyH4BNitric oxide synthase, brain1.14.13.390.593
1rs6H4BNitric oxide synthase, brain1.14.13.390.591
1zzrH4BNitric oxide synthase, brain1.14.13.390.591
4fw0H4BNitric oxide synthase, brain1.14.13.390.591
1p6jH4BNitric oxide synthase, brain1.14.13.390.590
3b3nH4BNitric oxide synthase, brain1.14.13.390.590
3n5yH4BNitric oxide synthase, brain1.14.13.390.590
3rqkH4BNitric oxide synthase, brain1.14.13.390.590
3jt6H4BNitric oxide synthase, brain1.14.13.390.589
3ufrH4BNitric oxide synthase, brain1.14.13.390.588
3jx2H4BNitric oxide synthase, brain1.14.13.390.587
1k2tH4BNitric oxide synthase, brain1.14.13.390.586
4luxH4BNitric oxide synthase, brain1.14.13.390.586
1zzqH4BNitric oxide synthase, brain1.14.13.390.585
3jwtH4BNitric oxide synthase, brain1.14.13.390.585
4cx4H4BNitric oxide synthase, brain1.14.13.390.583
3pnfH4BNitric oxide synthase, brain1.14.13.390.579
1rs7H4BNitric oxide synthase, brain1.14.13.390.578
3nnyH4BNitric oxide synthase, brain1.14.13.390.578
1om5H4BNitric oxide synthase, brain1.14.13.390.577
3jx5H4BNitric oxide synthase, brain1.14.13.390.577
3nlzH4BNitric oxide synthase, brain1.14.13.390.577
4jsiH4BNitric oxide synthase, brain1.14.13.390.571
3n63XFNNitric oxide synthase, brain1.14.13.390.570
4imuH4BNitric oxide synthase, brain1.14.13.390.569
3rqmH4BNitric oxide synthase, brain1.14.13.390.567
4cx3H4BNitric oxide synthase, brain1.14.13.390.567
3jt4H4BNitric oxide synthase, brain1.14.13.390.564
3pngH4BNitric oxide synthase, brain1.14.13.390.564
4jseH4BNitric oxide synthase, brain1.14.13.390.564
3tymH4BNitric oxide synthase, brain1.14.13.390.563
4imw1EVNitric oxide synthase, brain1.14.13.390.563
4jsfH4BNitric oxide synthase, brain1.14.13.390.562
3n5vH4BNitric oxide synthase, brain1.14.13.390.560
4fvxH4BNitric oxide synthase, brain1.14.13.390.560
3jx3H4BNitric oxide synthase, brain1.14.13.390.558
3ufwH4BNitric oxide synthase, brain1.14.13.390.558
2hx44HXNitric oxide synthase, brain1.14.13.390.557
3jx4H4BNitric oxide synthase, brain1.14.13.390.557
3q99H4BNitric oxide synthase, brain1.14.13.390.557
4k5gH4BNitric oxide synthase, brain1.14.13.390.556
3ufuH4BNitric oxide synthase, brain1.14.13.390.553
3nljH4BNitric oxide synthase, brain1.14.13.390.552
3jt5H4BNitric oxide synthase, brain1.14.13.390.551
4fvyH4BNitric oxide synthase, brain1.14.13.390.551
3fc5H4BNitric oxide synthase, brain1.14.13.390.550
3jt8H4BNitric oxide synthase, brain1.14.13.390.549
4imtH4BNitric oxide synthase, brain1.14.13.390.549
1zzuH4BNitric oxide synthase, brain1.14.13.390.548
3jt3H4BNitric oxide synthase, brain1.14.13.390.546
3q9aH4BNitric oxide synthase, brain1.14.13.390.542
3n5zXFMNitric oxide synthase, brain1.14.13.390.541
3ufpH4WNitric oxide synthase, brain1.14.13.390.541
4k5e1Q7Nitric oxide synthase, brain1.14.13.390.541
4imwH4BNitric oxide synthase, brain1.14.13.390.540
3jt7H4BNitric oxide synthase, brain1.14.13.390.538
3e7gH4BNitric oxide synthase, inducible1.14.13.390.533
2g6iHBINitric oxide synthase, brain1.14.13.390.532
3svqH4BNitric oxide synthase, brain1.14.13.390.532
3b3oJI3Nitric oxide synthase, brain1.14.13.390.530
3rqlH4BNitric oxide synthase, brain1.14.13.390.530
4jshH4BNitric oxide synthase, brain1.14.13.390.530
4k5dH4BNitric oxide synthase, brain1.14.13.390.530
3jx0JI4Nitric oxide synthase, brain1.14.13.390.529
3tym08RNitric oxide synthase, brain1.14.13.390.524
3nlv3XANitric oxide synthase, brain1.14.13.390.523
2g6j7APNitric oxide synthase, brain1.14.13.390.522
1mmvH4BNitric oxide synthase, brain1.14.13.390.521
3b3pJI7Nitric oxide synthase, brain1.14.13.390.521
3jt9H4BNitric oxide synthase, brain1.14.13.390.521
3n5xXFKNitric oxide synthase, brain1.14.13.390.521
3n65XFJNitric oxide synthase, brain1.14.13.390.521
3jx2JI4Nitric oxide synthase, brain1.14.13.390.520
3jtaH4BNitric oxide synthase, brain1.14.13.390.519
3nlnJRSNitric oxide synthase, brain1.14.13.390.518
3nny59RNitric oxide synthase, brain1.14.13.390.518
3nnz59WNitric oxide synthase, brain1.14.13.390.518
3n5wXFJNitric oxide synthase, brain1.14.13.390.516
1r35H4BNitric oxide synthase, inducible1.14.13.390.515
3n62XFJNitric oxide synthase, brain1.14.13.390.515
3ufqHW5Nitric oxide synthase, brain1.14.13.390.515
3jx6H4BNitric oxide synthase, brain1.14.13.390.514
3ufvHW9Nitric oxide synthase, brain1.14.13.390.513
1zvlH4BNitric oxide synthase, brain1.14.13.390.512
3jwsJI4Nitric oxide synthase, brain1.14.13.390.511
4k5fQ14Nitric oxide synthase, brain1.14.13.390.510
3e6tH4BNitric oxide synthase, inducible1.14.13.390.508
3ufoHW4Nitric oxide synthase, brain1.14.13.390.508
4k5d1Q6Nitric oxide synthase, brain1.14.13.390.508
3pne8AXNitric oxide synthase, brain1.14.13.390.507
3dwjH4BNitric oxide synthase, inducible1.14.13.390.505
3n60XFNNitric oxide synthase, brain1.14.13.390.505
3nlpJSSNitric oxide synthase, brain1.14.13.390.505
3n61H4BNitric oxide synthase, brain1.14.13.390.504
3ufrH5WNitric oxide synthase, brain1.14.13.390.504
3ufsHW6Nitric oxide synthase, brain1.14.13.390.504
3nlrJRSNitric oxide synthase, brain1.14.13.390.503
3tylAXWNitric oxide synthase, brain1.14.13.390.501
4luxQJ8Nitric oxide synthase, brain1.14.13.390.501
1p6jDP9Nitric oxide synthase, brain1.14.13.390.500
4jsgQ10Nitric oxide synthase, brain1.14.13.390.500
3nlqJRRNitric oxide synthase, brain1.14.13.390.499
3jwtJI5Nitric oxide synthase, brain1.14.13.390.498
3nlw3XFNitric oxide synthase, brain1.14.13.390.497
4cx4HW9Nitric oxide synthase, brain1.14.13.390.497
3rqkX2CNitric oxide synthase, brain1.14.13.390.495
3nosH4BNitric oxide synthase, endothelial1.14.13.390.494
4cx5HW8Nitric oxide synthase, brain1.14.13.390.494
3jx5J14Nitric oxide synthase, brain1.14.13.390.493
3nly3XCNitric oxide synthase, brain1.14.13.390.490
3jx4J11Nitric oxide synthase, brain1.14.13.390.489
3nw2H4BNitric oxide synthase, inducible1.14.13.390.489
1rs6DP2Nitric oxide synthase, brain1.14.13.390.488
4cx3HW8Nitric oxide synthase, brain1.14.13.390.488
3e6oH4BNitric oxide synthase, inducible1.14.13.390.487
3n66XFNNitric oxide synthase, brain1.14.13.390.487
4d1oH4BNitric oxide synthase, endothelial1.14.13.390.485
1zzqDP9Nitric oxide synthase, brain1.14.13.390.484
4k5gQ13Nitric oxide synthase, brain1.14.13.390.484
1qomH4BNitric oxide synthase, inducible1.14.13.390.483
3pnf8BXNitric oxide synthase, brain1.14.13.390.482
4euxHW1Nitric oxide synthase, brain1.14.13.390.482
2nodH4BNitric oxide synthase, inducible1.14.13.390.480
3nlz3XDNitric oxide synthase, brain1.14.13.390.480
4jsfQJ4Nitric oxide synthase, brain1.14.13.390.480
3rqmX2ENitric oxide synthase, brain1.14.13.390.474
4jsiQ05Nitric oxide synthase, brain1.14.13.390.474
3ufuHW8Nitric oxide synthase, brain1.14.13.390.472
3svpH4BNitric oxide synthase, brain1.14.13.390.471
3n5vXFHNitric oxide synthase, brain1.14.13.390.470
3n5yXFLNitric oxide synthase, brain1.14.13.390.470
3png8CXNitric oxide synthase, brain1.14.13.390.470
4imt1EWNitric oxide synthase, brain1.14.13.390.470
4imu1ETNitric oxide synthase, brain1.14.13.390.469
3jx6JI5Nitric oxide synthase, brain1.14.13.390.467
3nljJRRNitric oxide synthase, brain1.14.13.390.467
3ufwHW0Nitric oxide synthase, brain1.14.13.390.467
3e67H4BNitric oxide synthase, inducible1.14.13.390.465
1zzuDP1Nitric oxide synthase, brain1.14.13.390.461
3svpJK5Nitric oxide synthase, brain1.14.13.390.460
3rqjY2BNitric oxide synthase, brain1.14.13.390.454
3rqlX2DNitric oxide synthase, brain1.14.13.390.453
1k2sH4BNitric oxide synthase, brain1.14.13.390.446
3e7tB14Nitric oxide synthase, inducible1.14.13.390.441