Cavities are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
3n82 | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 |
PDB ID | HET | Uniprot Name | EC Number | Cavity Similarity |
Align |
---|---|---|---|---|---|
3n82 | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 1.000 | |
2onp | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.758 | |
1o00 | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.621 | |
1nzz | NAI | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.604 | |
4fqf | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.590 | |
1o02 | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.575 | |
4fr8 | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.575 | |
1o01 | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.559 | |
1nzw | NAI | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.549 | |
1cw3 | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.548 | |
1o04 | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.534 | |
4fr8 | ADP | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.529 | |
1nzx | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.521 | |
2bhp | NAD | 1-pyrroline-5-carboxylate dehydrogenase | / | 0.509 | |
2onm | ADP | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.496 | |
4pz2 | NAD | Aldehyde dehydrogenase 2-6 | / | 0.496 | |
2onm | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.495 | |
3n83 | ADP | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.492 | |
2eii | NAD | 1-pyrroline-5-carboxylate dehydrogenase | / | 0.477 | |
2j5n | NAD | 1-pyrroline-5-carboxylate dehydrogenase | / | 0.466 | |
4pt0 | NAD | Aldehyde dehydrogenase | / | 0.466 | |
2ehq | NAP | 1-pyrroline-5-carboxylate dehydrogenase | / | 0.463 | |
4v37 | NAD | Betaine aldehyde dehydrogenase, chloroplastic | 1.2.1.8 | 0.460 | |
2bja | NAD | 1-pyrroline-5-carboxylate dehydrogenase | / | 0.459 | |
2j40 | NAD | 1-pyrroline-5-carboxylate dehydrogenase | / | 0.456 | |
2ehu | NAD | 1-pyrroline-5-carboxylate dehydrogenase | / | 0.451 | |
4pxl | NAD | Aldehyde dehydrogenase3 | / | 0.447 |