scPDB - Distribution of Cavity Similarity values of 3n62 entry / Site 1

Distribution of Cavity similarities measured by Shaper

You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
3n62	XFJ	Nitric oxide synthase, brain	1.14.13.39

Complex with similar cavities

PDB ID	HET	Uniprot Name	EC Number	Cavity Similarity
3n62	XFJ	Nitric oxide synthase, brain	1.14.13.39	1.000
3n5x	XFK	Nitric oxide synthase, brain	1.14.13.39	0.716
4k5g	Q13	Nitric oxide synthase, brain	1.14.13.39	0.634
3n5w	XFJ	Nitric oxide synthase, brain	1.14.13.39	0.631
3n65	XFJ	Nitric oxide synthase, brain	1.14.13.39	0.619
3jwt	JI5	Nitric oxide synthase, brain	1.14.13.39	0.616
3svp	JK5	Nitric oxide synthase, brain	1.14.13.39	0.608
3nlz	3XD	Nitric oxide synthase, brain	1.14.13.39	0.582
4cx5	HW8	Nitric oxide synthase, brain	1.14.13.39	0.581
3png	8CX	Nitric oxide synthase, brain	1.14.13.39	0.562
3jwt	H4B	Nitric oxide synthase, brain	1.14.13.39	0.559
3rql	X2D	Nitric oxide synthase, brain	1.14.13.39	0.559
4imt	1EW	Nitric oxide synthase, brain	1.14.13.39	0.545
3rqm	X2E	Nitric oxide synthase, brain	1.14.13.39	0.544
4cx3	HW8	Nitric oxide synthase, brain	1.14.13.39	0.544
3n60	XFN	Nitric oxide synthase, brain	1.14.13.39	0.543
3pnf	8BX	Nitric oxide synthase, brain	1.14.13.39	0.542
3nlz	H4B	Nitric oxide synthase, brain	1.14.13.39	0.537
3nlr	JRS	Nitric oxide synthase, brain	1.14.13.39	0.533
3ufu	HW8	Nitric oxide synthase, brain	1.14.13.39	0.532
3n66	XFN	Nitric oxide synthase, brain	1.14.13.39	0.529
3n63	XFN	Nitric oxide synthase, brain	1.14.13.39	0.528
3pne	8AX	Nitric oxide synthase, brain	1.14.13.39	0.525
3n61	XFJ	Nitric oxide synthase, brain	1.14.13.39	0.523
4lux	QJ8	Nitric oxide synthase, brain	1.14.13.39	0.522
3nlp	JSS	Nitric oxide synthase, brain	1.14.13.39	0.521
3tym	08R	Nitric oxide synthase, brain	1.14.13.39	0.519
4imu	1ET	Nitric oxide synthase, brain	1.14.13.39	0.519
4fw0	H4B	Nitric oxide synthase, brain	1.14.13.39	0.517
4k5d	1Q6	Nitric oxide synthase, brain	1.14.13.39	0.514
4imw	1EV	Nitric oxide synthase, brain	1.14.13.39	0.513
4lux	H4B	Nitric oxide synthase, brain	1.14.13.39	0.513
3jx0	JI4	Nitric oxide synthase, brain	1.14.13.39	0.512
3jx6	JI5	Nitric oxide synthase, brain	1.14.13.39	0.512
3nlv	3XA	Nitric oxide synthase, brain	1.14.13.39	0.511
3n5y	H4B	Nitric oxide synthase, brain	1.14.13.39	0.510
4eux	HW1	Nitric oxide synthase, brain	1.14.13.39	0.509
3jx5	J14	Nitric oxide synthase, brain	1.14.13.39	0.508
3rqj	H4B	Nitric oxide synthase, brain	1.14.13.39	0.508
3nny	59R	Nitric oxide synthase, brain	1.14.13.39	0.507
3b3o	H4B	Nitric oxide synthase, brain	1.14.13.39	0.503
3ufv	HW9	Nitric oxide synthase, brain	1.14.13.39	0.503
3ufw	HW0	Nitric oxide synthase, brain	1.14.13.39	0.503
3jx3	JI5	Nitric oxide synthase, brain	1.14.13.39	0.502
3rqj	Y2B	Nitric oxide synthase, brain	1.14.13.39	0.502
1p6k	H4B	Nitric oxide synthase, brain	1.14.13.39	0.501
3jx3	H4B	Nitric oxide synthase, brain	1.14.13.39	0.501
3rqk	X2C	Nitric oxide synthase, brain	1.14.13.39	0.500
4cx4	HW9	Nitric oxide synthase, brain	1.14.13.39	0.499
3pnf	H4B	Nitric oxide synthase, brain	1.14.13.39	0.497
4jsi	Q05	Nitric oxide synthase, brain	1.14.13.39	0.496
3n5v	XFH	Nitric oxide synthase, brain	1.14.13.39	0.495
3jws	JI4	Nitric oxide synthase, brain	1.14.13.39	0.493
3ufu	H4B	Nitric oxide synthase, brain	1.14.13.39	0.493
4jsf	QJ4	Nitric oxide synthase, brain	1.14.13.39	0.493
3jx4	J11	Nitric oxide synthase, brain	1.14.13.39	0.492
3nlj	JRR	Nitric oxide synthase, brain	1.14.13.39	0.491
3png	H4B	Nitric oxide synthase, brain	1.14.13.39	0.490
4fvy	H4B	Nitric oxide synthase, brain	1.14.13.39	0.490
3nlq	JRR	Nitric oxide synthase, brain	1.14.13.39	0.489
4imu	H4B	Nitric oxide synthase, brain	1.14.13.39	0.489
3jx2	JI4	Nitric oxide synthase, brain	1.14.13.39	0.487
4imt	H4B	Nitric oxide synthase, brain	1.14.13.39	0.487
3svq	JK4	Nitric oxide synthase, brain	1.14.13.39	0.484
3n61	H4B	Nitric oxide synthase, brain	1.14.13.39	0.483
3nlw	3XF	Nitric oxide synthase, brain	1.14.13.39	0.482
3nnz	H4B	Nitric oxide synthase, brain	1.14.13.39	0.482
3ufs	HW6	Nitric oxide synthase, brain	1.14.13.39	0.482
3jwv	H4B	Nitric oxide synthase, brain	1.14.13.39	0.481
3nln	JRS	Nitric oxide synthase, brain	1.14.13.39	0.480
3jt5	H4B	Nitric oxide synthase, brain	1.14.13.39	0.479
4cx3	H4B	Nitric oxide synthase, brain	1.14.13.39	0.478
1zzr	H4B	Nitric oxide synthase, brain	1.14.13.39	0.477
3uft	HW7	Nitric oxide synthase, brain	1.14.13.39	0.476
1m00	H4B	Nitric oxide synthase, brain	1.14.13.39	0.475
3jt9	H4B	Nitric oxide synthase, brain	1.14.13.39	0.475
4jsg	Q10	Nitric oxide synthase, brain	1.14.13.39	0.474
2g6i	HBI	Nitric oxide synthase, brain	1.14.13.39	0.473
3nly	3XC	Nitric oxide synthase, brain	1.14.13.39	0.473
3rqm	H4B	Nitric oxide synthase, brain	1.14.13.39	0.470
3b3p	JI7	Nitric oxide synthase, brain	1.14.13.39	0.469
3nlp	H4B	Nitric oxide synthase, brain	1.14.13.39	0.469
3b3p	H4B	Nitric oxide synthase, brain	1.14.13.39	0.468
2hx4	H4B	Nitric oxide synthase, brain	1.14.13.39	0.465
3n5y	XFL	Nitric oxide synthase, brain	1.14.13.39	0.465
3n5v	H4B	Nitric oxide synthase, brain	1.14.13.39	0.464
3pne	H4B	Nitric oxide synthase, brain	1.14.13.39	0.464
3nny	H4B	Nitric oxide synthase, brain	1.14.13.39	0.463
3ufv	H4B	Nitric oxide synthase, brain	1.14.13.39	0.463
3b3n	H4B	Nitric oxide synthase, brain	1.14.13.39	0.462
3n5z	XFM	Nitric oxide synthase, brain	1.14.13.39	0.462
3nnz	59W	Nitric oxide synthase, brain	1.14.13.39	0.459
4eux	H4B	Nitric oxide synthase, brain	1.14.13.39	0.459
1p6j	DP9	Nitric oxide synthase, brain	1.14.13.39	0.457
3rqk	H4B	Nitric oxide synthase, brain	1.14.13.39	0.457
4jsf	H4B	Nitric oxide synthase, brain	1.14.13.39	0.457
3jt8	H4B	Nitric oxide synthase, brain	1.14.13.39	0.456
4jsj	QJ7	Nitric oxide synthase, brain	1.14.13.39	0.456
3nlv	H4B	Nitric oxide synthase, brain	1.14.13.39	0.455
4imw	H4B	Nitric oxide synthase, brain	1.14.13.39	0.455
3ufr	H5W	Nitric oxide synthase, brain	1.14.13.39	0.454
4k5f	Q14	Nitric oxide synthase, brain	1.14.13.39	0.453
4k5g	H4B	Nitric oxide synthase, brain	1.14.13.39	0.453
3rql	H4B	Nitric oxide synthase, brain	1.14.13.39	0.452
3jt7	H4B	Nitric oxide synthase, brain	1.14.13.39	0.450
3ufp	H4W	Nitric oxide synthase, brain	1.14.13.39	0.450
3uft	H4B	Nitric oxide synthase, brain	1.14.13.39	0.449
4jsi	H4B	Nitric oxide synthase, brain	1.14.13.39	0.449
3ufs	H4B	Nitric oxide synthase, brain	1.14.13.39	0.448
3ufo	HW4	Nitric oxide synthase, brain	1.14.13.39	0.445
4cx5	H4B	Nitric oxide synthase, brain	1.14.13.39	0.445
2hx4	4HX	Nitric oxide synthase, brain	1.14.13.39	0.444
3nlj	H4B	Nitric oxide synthase, brain	1.14.13.39	0.442
3tyl	H4B	Nitric oxide synthase, brain	1.14.13.39	0.442
3jx5	H4B	Nitric oxide synthase, brain	1.14.13.39	0.440