scPDB - Distribution of Cavity Similarity values of 3n61 entry / Site 3

Distribution of Cavity similarities measured by Shaper

You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
3n61	XFJ	Nitric oxide synthase, brain	1.14.13.39

Complex with similar cavities

PDB ID	HET	Uniprot Name	EC Number	Cavity Similarity
3n61	XFJ	Nitric oxide synthase, brain	1.14.13.39	1.000
4cx4	HW9	Nitric oxide synthase, brain	1.14.13.39	0.744
3n61	H4B	Nitric oxide synthase, brain	1.14.13.39	0.740
4jsf	QJ4	Nitric oxide synthase, brain	1.14.13.39	0.666
3ufs	HW6	Nitric oxide synthase, brain	1.14.13.39	0.644
4imu	1ET	Nitric oxide synthase, brain	1.14.13.39	0.644
3ufv	HW9	Nitric oxide synthase, brain	1.14.13.39	0.637
3rqj	Y2B	Nitric oxide synthase, brain	1.14.13.39	0.630
3pne	8AX	Nitric oxide synthase, brain	1.14.13.39	0.624
3nlq	JRR	Nitric oxide synthase, brain	1.14.13.39	0.623
3n63	XFN	Nitric oxide synthase, brain	1.14.13.39	0.621
3nnz	59W	Nitric oxide synthase, brain	1.14.13.39	0.621
3ufw	HW0	Nitric oxide synthase, brain	1.14.13.39	0.619
3n65	XFJ	Nitric oxide synthase, brain	1.14.13.39	0.617
3n5y	XFL	Nitric oxide synthase, brain	1.14.13.39	0.611
3n5z	XFM	Nitric oxide synthase, brain	1.14.13.39	0.607
1zzq	DP9	Nitric oxide synthase, brain	1.14.13.39	0.604
3jx3	JI5	Nitric oxide synthase, brain	1.14.13.39	0.603
1zzu	DP1	Nitric oxide synthase, brain	1.14.13.39	0.600
3n5x	XFK	Nitric oxide synthase, brain	1.14.13.39	0.594
3n66	XFN	Nitric oxide synthase, brain	1.14.13.39	0.594
3n5w	XFJ	Nitric oxide synthase, brain	1.14.13.39	0.590
4cx3	HW8	Nitric oxide synthase, brain	1.14.13.39	0.587
3nny	59R	Nitric oxide synthase, brain	1.14.13.39	0.584
3b3o	JI3	Nitric oxide synthase, brain	1.14.13.39	0.583
3n62	XFJ	Nitric oxide synthase, brain	1.14.13.39	0.582
4eux	HW1	Nitric oxide synthase, brain	1.14.13.39	0.581
4k5g	Q13	Nitric oxide synthase, brain	1.14.13.39	0.579
4imt	1EW	Nitric oxide synthase, brain	1.14.13.39	0.576
3jwt	JI5	Nitric oxide synthase, brain	1.14.13.39	0.574
3rqk	X2C	Nitric oxide synthase, brain	1.14.13.39	0.569
1zzr	DP9	Nitric oxide synthase, brain	1.14.13.39	0.568
4lux	QJ8	Nitric oxide synthase, brain	1.14.13.39	0.566
3nly	3XC	Nitric oxide synthase, brain	1.14.13.39	0.564
3pnf	8BX	Nitric oxide synthase, brain	1.14.13.39	0.563
3rqm	X2E	Nitric oxide synthase, brain	1.14.13.39	0.562
3svp	JK5	Nitric oxide synthase, brain	1.14.13.39	0.562
3nlz	3XD	Nitric oxide synthase, brain	1.14.13.39	0.560
4imw	1EV	Nitric oxide synthase, brain	1.14.13.39	0.560
3png	8CX	Nitric oxide synthase, brain	1.14.13.39	0.558
4cx5	HW8	Nitric oxide synthase, brain	1.14.13.39	0.558
3n60	XFN	Nitric oxide synthase, brain	1.14.13.39	0.557
3ufu	HW8	Nitric oxide synthase, brain	1.14.13.39	0.557
3nlj	JRR	Nitric oxide synthase, brain	1.14.13.39	0.556
3nlv	3XA	Nitric oxide synthase, brain	1.14.13.39	0.547
3rql	X2D	Nitric oxide synthase, brain	1.14.13.39	0.543
3ufp	H4W	Nitric oxide synthase, brain	1.14.13.39	0.543
2hx4	4HX	Nitric oxide synthase, brain	1.14.13.39	0.541
4k5g	H4B	Nitric oxide synthase, brain	1.14.13.39	0.540
4cx4	H4B	Nitric oxide synthase, brain	1.14.13.39	0.538
3nlr	JRS	Nitric oxide synthase, brain	1.14.13.39	0.535
4imu	H4B	Nitric oxide synthase, brain	1.14.13.39	0.527
3nlp	JSS	Nitric oxide synthase, brain	1.14.13.39	0.525
3jx6	JI5	Nitric oxide synthase, brain	1.14.13.39	0.524
4jsi	Q05	Nitric oxide synthase, brain	1.14.13.39	0.520
4jsg	Q10	Nitric oxide synthase, brain	1.14.13.39	0.519
3uft	HW7	Nitric oxide synthase, brain	1.14.13.39	0.518
4jsf	H4B	Nitric oxide synthase, brain	1.14.13.39	0.517
4cx5	H4B	Nitric oxide synthase, brain	1.14.13.39	0.514
3jx2	JI4	Nitric oxide synthase, brain	1.14.13.39	0.512
3nlw	3XF	Nitric oxide synthase, brain	1.14.13.39	0.509
3ufv	H4B	Nitric oxide synthase, brain	1.14.13.39	0.508
3jx4	J11	Nitric oxide synthase, brain	1.14.13.39	0.507
3jws	JI4	Nitric oxide synthase, brain	1.14.13.39	0.502
3tym	08R	Nitric oxide synthase, brain	1.14.13.39	0.502
3ufs	H4B	Nitric oxide synthase, brain	1.14.13.39	0.501
4k5d	1Q6	Nitric oxide synthase, brain	1.14.13.39	0.501
3jx5	J14	Nitric oxide synthase, brain	1.14.13.39	0.500
4k5f	Q14	Nitric oxide synthase, brain	1.14.13.39	0.500
3svq	JK4	Nitric oxide synthase, brain	1.14.13.39	0.499
3jx0	JI4	Nitric oxide synthase, brain	1.14.13.39	0.497
4eux	H4B	Nitric oxide synthase, brain	1.14.13.39	0.496
3nlo	JSR	Nitric oxide synthase, brain	1.14.13.39	0.489
3nln	JRS	Nitric oxide synthase, brain	1.14.13.39	0.487
3b3p	JI7	Nitric oxide synthase, brain	1.14.13.39	0.486
3ufo	HW4	Nitric oxide synthase, brain	1.14.13.39	0.486
1p6j	DP9	Nitric oxide synthase, brain	1.14.13.39	0.485
3jx6	H4B	Nitric oxide synthase, brain	1.14.13.39	0.484
3n5v	XFH	Nitric oxide synthase, brain	1.14.13.39	0.484
3pne	H4B	Nitric oxide synthase, brain	1.14.13.39	0.482
3nlq	H4B	Nitric oxide synthase, brain	1.14.13.39	0.481
3tyl	AXW	Nitric oxide synthase, brain	1.14.13.39	0.481
1rs6	DP2	Nitric oxide synthase, brain	1.14.13.39	0.478
4lux	H4B	Nitric oxide synthase, brain	1.14.13.39	0.478
3ufq	HW5	Nitric oxide synthase, brain	1.14.13.39	0.476
3ufr	H5W	Nitric oxide synthase, brain	1.14.13.39	0.473
1zzq	H4B	Nitric oxide synthase, brain	1.14.13.39	0.471
3nlk	JSS	Nitric oxide synthase, brain	1.14.13.39	0.471
5agl	H4B	Nitric oxide synthase, brain	1.14.13.39	0.470
3nlj	H4B	Nitric oxide synthase, brain	1.14.13.39	0.465
3ufw	H4B	Nitric oxide synthase, brain	1.14.13.39	0.465
4jsh	Q15	Nitric oxide synthase, brain	1.14.13.39	0.465
4cx3	H4B	Nitric oxide synthase, brain	1.14.13.39	0.464
3nly	H4B	Nitric oxide synthase, brain	1.14.13.39	0.463
3ufo	H4B	Nitric oxide synthase, brain	1.14.13.39	0.461
3jwu	J11	Nitric oxide synthase, brain	1.14.13.39	0.454
3jx3	H4B	Nitric oxide synthase, brain	1.14.13.39	0.453
4k5e	1Q7	Nitric oxide synthase, brain	1.14.13.39	0.451
2g6j	7AP	Nitric oxide synthase, brain	1.14.13.39	0.448
3q99	H4B	Nitric oxide synthase, brain	1.14.13.39	0.447
4imw	H4B	Nitric oxide synthase, brain	1.14.13.39	0.447
3ufu	H4B	Nitric oxide synthase, brain	1.14.13.39	0.446
4imt	H4B	Nitric oxide synthase, brain	1.14.13.39	0.446
3n5z	H4B	Nitric oxide synthase, brain	1.14.13.39	0.445
3nlz	H4B	Nitric oxide synthase, brain	1.14.13.39	0.444
3nny	H4B	Nitric oxide synthase, brain	1.14.13.39	0.444
3pnf	H4B	Nitric oxide synthase, brain	1.14.13.39	0.444
3dqr	H4B	Nitric oxide synthase, brain	1.14.13.39	0.443
3tym	H4B	Nitric oxide synthase, brain	1.14.13.39	0.443
3jt3	H4B	Nitric oxide synthase, brain	1.14.13.39	0.442
4gqe	H4B	Nitric oxide synthase, brain	1.14.13.39	0.442