Cavities are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
3mvy | BHZ | Nickel-binding periplasmic protein |
PDB ID | HET | Uniprot Name | EC Number | Cavity Similarity |
Align |
---|---|---|---|---|---|
3mvy | BHZ | Nickel-binding periplasmic protein | / | 1.000 | |
3mvz | BHN | Nickel-binding periplasmic protein | / | 0.750 | |
3mw0 | BHR | Nickel-binding periplasmic protein | / | 0.670 | |
3mzb | BHR | Nickel-binding periplasmic protein | / | 0.556 | |
3mz9 | BHN | Nickel-binding periplasmic protein | / | 0.473 | |
3mvw | BHZ | Nickel-binding periplasmic protein | / | 0.442 |