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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3m0iZSTAldose reductase1.1.1.21

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
3m0iZSTAldose reductase1.1.1.211.000
3mb9ZSTAldose reductase1.1.1.210.553
3mc5393Aldose reductase1.1.1.210.551
3lenZSTAldose reductase1.1.1.210.526
2pdh47DAldose reductase1.1.1.210.513
1t40ID5Aldose reductase1.1.1.210.510
2dv0ZSTAldose reductase1.1.1.210.505
3m4h388Aldose reductase1.1.1.210.504
1z3n3NAAldose reductase1.1.1.210.501
3lboLDTAldose reductase1.1.1.210.501
2pdbZSTAldose reductase1.1.1.210.500
3lqlLDTAldose reductase1.1.1.210.497
1z8962PAldose reductase1.1.1.210.494
2pd5ZSTAldose reductase1.1.1.210.493
3m64393Aldose reductase1.1.1.210.493
2pdp393Aldose reductase1.1.1.210.491
1frbZSTAldose reductase-related protein 2/0.489
2pdmZSTAldose reductase1.1.1.210.489
3ghrLDTAldose reductase1.1.1.210.488
2duxZSTAldose reductase1.1.1.210.483
2fz9ZSTAldose reductase1.1.1.210.481
2pdc393Aldose reductase1.1.1.210.481
2i16LDTAldose reductase1.1.1.210.478
2ikj393Aldose reductase1.1.1.210.473
2pdg47DAldose reductase1.1.1.210.473
2pzn393Aldose reductase1.1.1.210.472
3ghuLDTAldose reductase1.1.1.210.472
1us0LDTAldose reductase1.1.1.210.471
2fz8ZSTAldose reductase1.1.1.210.471
3t423T4Aldose reductase1.1.1.210.471
1t41ID5Aldose reductase1.1.1.210.470
4yu153NAldose reductase1.1.1.210.470
3ghtLDTAldose reductase1.1.1.210.469
3ld5LDTAldose reductase1.1.1.210.467
2i17LDTAldose reductase1.1.1.210.465
2pdfZSTAldose reductase1.1.1.210.465
3ghsLDTAldose reductase1.1.1.210.464
3lz5LDTAldose reductase1.1.1.210.463
2iki388Aldose reductase1.1.1.210.456
1ieiZESAldose reductase1.1.1.210.453
2qxwLDTAldose reductase1.1.1.210.452
2pdn47DAldose reductase1.1.1.210.444
4bbhYBNGlycylpeptide N-tetradecanoyltransferase/0.444