Cavities are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
3kt3 | TYM | Tryptophan--tRNA ligase, cytoplasmic | 6.1.1.2 |
PDB ID | HET | Uniprot Name | EC Number | Cavity Similarity |
Align |
---|---|---|---|---|---|
3kt3 | TYM | Tryptophan--tRNA ligase, cytoplasmic | 6.1.1.2 | 1.000 | |
1r6u | TYM | Tryptophan--tRNA ligase, cytoplasmic | 6.1.1.2 | 0.470 | |
1r6t | TYM | Tryptophan--tRNA ligase, cytoplasmic | 6.1.1.2 | 0.469 | |
3jxe | TYM | Tryptophan--tRNA ligase | / | 0.463 | |
2quj | TYM | Tryptophan--tRNA ligase, cytoplasmic | 6.1.1.2 | 0.453 |