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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3kkvB99cAMP-dependent protein kinase catalytic subunit alpha2.7.11.11

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
3kkvB99cAMP-dependent protein kinase catalytic subunit alpha2.7.11.111.000
3oogYTPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.582
2uzuL20cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.572
2f7e2EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.567
2jdsL20cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.567
2oh02PYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.565
1q8uH52cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.554
2uzvSS5cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.545
2ojf4PYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.532
2uzwSS4cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.532
2f7z6EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.531
1ydtIQBcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.528
3zo1SIJcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.523
1ydrIQPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.514
2vo0M03cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.512
2vo6M05cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.508
1q8wM77cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.507
2uw0GVKcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.503
3e8eG98cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.499
4fg7ATPCalcium/calmodulin-dependent protein kinase type 12.7.11.170.496
2uztSS3cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.491
1q8tY27cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.483
2uw4L15cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.482
3e8cG96cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.480
4yxsEMUcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.477
3dndLL2cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.475
2jdtI5ScAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.470
3bwjARXcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.468
2vo7M05cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.465
3cqwCQWRAC-alpha serine/threonine-protein kinase2.7.11.10.464
3bqr4RBDeath-associated protein kinase 3/0.463
3aglA03cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.461
4ekl0RFRAC-alpha serine/threonine-protein kinase2.7.11.10.461
2f7x4EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.459
2vnwM01cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.459
4dit0KDGlycogen synthase kinase-3 beta2.7.11.260.458
3dneLL1cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.457
4c34STUcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.457
2gu8796cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.456
3ambVX6cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.456
4gv10XZRAC-alpha serine/threonine-protein kinase2.7.11.10.455
2vo3M04cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.454
3zo4QWIcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.454
2cgu3A3Serine/threonine-protein kinase Chk12.7.11.10.453
2hxl422Serine/threonine-protein kinase Chk12.7.11.10.452
1qpjSTUTyrosine-protein kinase Lck2.7.10.20.449
1rejB1LcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.448
2gnlH52cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.447
3a4oSTUTyrosine-protein kinase Lyn2.7.10.20.446
4ftiH7KSerine/threonine-protein kinase Chk12.7.11.10.443
2gnfY27cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.442
4iazADPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.442