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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3jt8H4BNitric oxide synthase, brain1.14.13.39

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
3jt8H4BNitric oxide synthase, brain1.14.13.391.000
3jt9H4BNitric oxide synthase, brain1.14.13.390.808
4fvyH4BNitric oxide synthase, brain1.14.13.390.722
3n5vH4BNitric oxide synthase, brain1.14.13.390.712
3jwvH4BNitric oxide synthase, brain1.14.13.390.703
3fc5H4BNitric oxide synthase, brain1.14.13.390.690
3tylH4BNitric oxide synthase, brain1.14.13.390.688
3jt7H4BNitric oxide synthase, brain1.14.13.390.679
4fw0H4BNitric oxide synthase, brain1.14.13.390.677
2g6iHBINitric oxide synthase, brain1.14.13.390.667
3jx3H4BNitric oxide synthase, brain1.14.13.390.667
3jwtH4BNitric oxide synthase, brain1.14.13.390.663
3b3oH4BNitric oxide synthase, brain1.14.13.390.661
3nnzH4BNitric oxide synthase, brain1.14.13.390.659
4luxH4BNitric oxide synthase, brain1.14.13.390.657
3jtaH4BNitric oxide synthase, brain1.14.13.390.649
3q99H4BNitric oxide synthase, brain1.14.13.390.642
3nlvH4BNitric oxide synthase, brain1.14.13.390.640
3q9aH4BNitric oxide synthase, brain1.14.13.390.639
3jt4H4BNitric oxide synthase, brain1.14.13.390.637
3jt6H4BNitric oxide synthase, brain1.14.13.390.635
4fvxH4BNitric oxide synthase, brain1.14.13.390.634
5agkH4BNitric oxide synthase, brain1.14.13.390.628
1zzrH4BNitric oxide synthase, brain1.14.13.390.625
3n5yH4BNitric oxide synthase, brain1.14.13.390.623
1k2uH4BNitric oxide synthase, brain1.14.13.390.619
4fvzH4BNitric oxide synthase, brain1.14.13.390.618
5agpH4BNitric oxide synthase, brain1.14.13.390.616
3jt3H4BNitric oxide synthase, brain1.14.13.390.611
1p6kH4BNitric oxide synthase, brain1.14.13.390.610
4k5dH4BNitric oxide synthase, brain1.14.13.390.610
3jx4H4BNitric oxide synthase, brain1.14.13.390.609
3nlnH4BNitric oxide synthase, brain1.14.13.390.609
3nlzH4BNitric oxide synthase, brain1.14.13.390.607
3ufqH4BNitric oxide synthase, brain1.14.13.390.606
3dqrH4BNitric oxide synthase, brain1.14.13.390.605
3n5zH4BNitric oxide synthase, brain1.14.13.390.605
3n62XFJNitric oxide synthase, brain1.14.13.390.602
2hx4H4BNitric oxide synthase, brain1.14.13.390.599
1om5H4BNitric oxide synthase, brain1.14.13.390.597
3jx5H4BNitric oxide synthase, brain1.14.13.390.597
1zzqH4BNitric oxide synthase, brain1.14.13.390.596
3jwuH4BNitric oxide synthase, brain1.14.13.390.596
4k5eH4BNitric oxide synthase, brain1.14.13.390.596
3tymH4BNitric oxide synthase, brain1.14.13.390.595
4imtH4BNitric oxide synthase, brain1.14.13.390.593
4imuH4BNitric oxide synthase, brain1.14.13.390.592
2g6j7APNitric oxide synthase, brain1.14.13.390.591
5aglH4BNitric oxide synthase, brain1.14.13.390.591
3ufoH4BNitric oxide synthase, brain1.14.13.390.590
3n5xXFKNitric oxide synthase, brain1.14.13.390.588
3nlwH4BNitric oxide synthase, brain1.14.13.390.588
3rqjH4BNitric oxide synthase, brain1.14.13.390.587
4jsgH4BNitric oxide synthase, brain1.14.13.390.586
1k2tH4BNitric oxide synthase, brain1.14.13.390.585
1zzuH4BNitric oxide synthase, brain1.14.13.390.585
4gqeH4BNitric oxide synthase, brain1.14.13.390.585
3nlw3XFNitric oxide synthase, brain1.14.13.390.582
1mmvH4BNitric oxide synthase, brain1.14.13.390.581
3nlkH4BNitric oxide synthase, brain1.14.13.390.578
3rqkH4BNitric oxide synthase, brain1.14.13.390.578
3jwsJI4Nitric oxide synthase, brain1.14.13.390.577
4euxH4BNitric oxide synthase, brain1.14.13.390.575
1m00H4BNitric oxide synthase, brain1.14.13.390.574
3b3nH4BNitric oxide synthase, brain1.14.13.390.572
4k5gH4BNitric oxide synthase, brain1.14.13.390.570
2hx3H4BNitric oxide synthase, brain1.14.13.390.569
3ufvH4BNitric oxide synthase, brain1.14.13.390.569
3nloH4BNitric oxide synthase, brain1.14.13.390.568
3pngH4BNitric oxide synthase, brain1.14.13.390.568
1zvlH4BNitric oxide synthase, brain1.14.13.390.567
3n5vXFHNitric oxide synthase, brain1.14.13.390.566
3nnyH4BNitric oxide synthase, brain1.14.13.390.564
4cx5H4BNitric oxide synthase, brain1.14.13.390.563
4jsiH4BNitric oxide synthase, brain1.14.13.390.563
3tym08RNitric oxide synthase, brain1.14.13.390.562
3nlrH4BNitric oxide synthase, brain1.14.13.390.561
3pnfH4BNitric oxide synthase, brain1.14.13.390.559
4cx4H4BNitric oxide synthase, brain1.14.13.390.558
3pneH4BNitric oxide synthase, brain1.14.13.390.556
4jsfH4BNitric oxide synthase, brain1.14.13.390.556
3ufsH4BNitric oxide synthase, brain1.14.13.390.554
3n5wXFJNitric oxide synthase, brain1.14.13.390.553
4jshH4BNitric oxide synthase, brain1.14.13.390.552
3rqlH4BNitric oxide synthase, brain1.14.13.390.551
3jwtJI5Nitric oxide synthase, brain1.14.13.390.550
3ufrH4BNitric oxide synthase, brain1.14.13.390.550
3jx6H4BNitric oxide synthase, brain1.14.13.390.549
3nlqH4BNitric oxide synthase, brain1.14.13.390.549
3nlpH4BNitric oxide synthase, brain1.14.13.390.547
4imwH4BNitric oxide synthase, brain1.14.13.390.546
1rs7H4BNitric oxide synthase, brain1.14.13.390.545
3nlv3XANitric oxide synthase, brain1.14.13.390.545
3nosH4BNitric oxide synthase, endothelial1.14.13.390.545
3tylAXWNitric oxide synthase, brain1.14.13.390.543
1p6jH4BNitric oxide synthase, brain1.14.13.390.542
4jseH4BNitric oxide synthase, brain1.14.13.390.542
3jx2H4BNitric oxide synthase, brain1.14.13.390.541
4luxQJ8Nitric oxide synthase, brain1.14.13.390.538
3ufwH4BNitric oxide synthase, brain1.14.13.390.537
3b3pH4BNitric oxide synthase, brain1.14.13.390.536
3uftH4BNitric oxide synthase, brain1.14.13.390.536
4d1oH4BNitric oxide synthase, endothelial1.14.13.390.535
4cx3H4BNitric oxide synthase, brain1.14.13.390.533
3ufoHW4Nitric oxide synthase, brain1.14.13.390.532
3ufpH4BNitric oxide synthase, brain1.14.13.390.531
3nlnJRSNitric oxide synthase, brain1.14.13.390.530
4k5fH4BNitric oxide synthase, brain1.14.13.390.530
3jx4J11Nitric oxide synthase, brain1.14.13.390.528
3n61H4BNitric oxide synthase, brain1.14.13.390.528
3nnz59WNitric oxide synthase, brain1.14.13.390.528
3svqH4BNitric oxide synthase, brain1.14.13.390.528
3n65XFJNitric oxide synthase, brain1.14.13.390.526
3jx0JI4Nitric oxide synthase, brain1.14.13.390.525
3n60XFNNitric oxide synthase, brain1.14.13.390.524
3b3mH4BNitric oxide synthase, brain1.14.13.390.522
3n63XFNNitric oxide synthase, brain1.14.13.390.518
3nlyH4BNitric oxide synthase, brain1.14.13.390.517
3ufuH4BNitric oxide synthase, brain1.14.13.390.517
4k5gQ13Nitric oxide synthase, brain1.14.13.390.516
3jx5J14Nitric oxide synthase, brain1.14.13.390.514
3n66XFNNitric oxide synthase, brain1.14.13.390.514
2hx44HXNitric oxide synthase, brain1.14.13.390.513
3n5yXFLNitric oxide synthase, brain1.14.13.390.513
1zzqDP9Nitric oxide synthase, brain1.14.13.390.512
3nodH4BNitric oxide synthase, inducible1.14.13.390.512
3rqlX2DNitric oxide synthase, brain1.14.13.390.512
3e7gH4BNitric oxide synthase, inducible1.14.13.390.509
1r35H4BNitric oxide synthase, inducible1.14.13.390.507
1zzuDP1Nitric oxide synthase, brain1.14.13.390.507
3svpH4BNitric oxide synthase, brain1.14.13.390.507
4imt1EWNitric oxide synthase, brain1.14.13.390.507
3jx6JI5Nitric oxide synthase, brain1.14.13.390.505
3nlz3XDNitric oxide synthase, brain1.14.13.390.503
3e6tH4BNitric oxide synthase, inducible1.14.13.390.502
3b3oJI3Nitric oxide synthase, brain1.14.13.390.500
3rqmH4BNitric oxide synthase, brain1.14.13.390.500
1dwxH4BNitric oxide synthase, inducible1.14.13.390.499
3ufqHW5Nitric oxide synthase, brain1.14.13.390.497
4imu1ETNitric oxide synthase, brain1.14.13.390.497
3jwuJ11Nitric oxide synthase, brain1.14.13.390.496
3dwjH4BNitric oxide synthase, inducible1.14.13.390.495
3n5zXFMNitric oxide synthase, brain1.14.13.390.495
1zzrDP9Nitric oxide synthase, brain1.14.13.390.494
3nlkJSSNitric oxide synthase, brain1.14.13.390.494
3svpJK5Nitric oxide synthase, brain1.14.13.390.492
4k5d1Q6Nitric oxide synthase, brain1.14.13.390.492
3nloJSRNitric oxide synthase, brain1.14.13.390.491
3nljH4BNitric oxide synthase, brain1.14.13.390.488
4imw1EVNitric oxide synthase, brain1.14.13.390.488
3png8CXNitric oxide synthase, brain1.14.13.390.485
3e6oH4BNitric oxide synthase, inducible1.14.13.390.484
1rs6H4BNitric oxide synthase, brain1.14.13.390.482
3ufrH5WNitric oxide synthase, brain1.14.13.390.482
3nny59RNitric oxide synthase, brain1.14.13.390.480
4cx4HW9Nitric oxide synthase, brain1.14.13.390.480
4k5fQ14Nitric oxide synthase, brain1.14.13.390.480
3nlrJRSNitric oxide synthase, brain1.14.13.390.477
4jsgQ10Nitric oxide synthase, brain1.14.13.390.477
3rqkX2CNitric oxide synthase, brain1.14.13.390.476
3jx2JI4Nitric oxide synthase, brain1.14.13.390.475
3ufwHW0Nitric oxide synthase, brain1.14.13.390.475
4euxHW1Nitric oxide synthase, brain1.14.13.390.475
1p6jDP9Nitric oxide synthase, brain1.14.13.390.474
2nodH4BNitric oxide synthase, inducible1.14.13.390.474
4k5e1Q7Nitric oxide synthase, brain1.14.13.390.474
3rqjY2BNitric oxide synthase, brain1.14.13.390.473
3nlqJRRNitric oxide synthase, brain1.14.13.390.469
3pne8AXNitric oxide synthase, brain1.14.13.390.469
4jsfQJ4Nitric oxide synthase, brain1.14.13.390.469
3jx3JI5Nitric oxide synthase, brain1.14.13.390.464
3pnf8BXNitric oxide synthase, brain1.14.13.390.464
3nw2H4BNitric oxide synthase, inducible1.14.13.390.463
1qomH4BNitric oxide synthase, inducible1.14.13.390.461
3nlpJSSNitric oxide synthase, brain1.14.13.390.461
3ufsHW6Nitric oxide synthase, brain1.14.13.390.459
3b3pJI7Nitric oxide synthase, brain1.14.13.390.458
1m8eH4BNitric oxide synthase, inducible1.14.13.390.457
3jt5H4BNitric oxide synthase, brain1.14.13.390.455
3nly3XCNitric oxide synthase, brain1.14.13.390.453
3ufpH4WNitric oxide synthase, brain1.14.13.390.453
3n61XFJNitric oxide synthase, brain1.14.13.390.452
4cx3HW8Nitric oxide synthase, brain1.14.13.390.446
3ufvHW9Nitric oxide synthase, brain1.14.13.390.441
3uftHW7Nitric oxide synthase, brain1.14.13.390.440
4cx5HW8Nitric oxide synthase, brain1.14.13.390.440