Cavities are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
3iu7 | FCD | Methionine aminopeptidase 2 |
PDB ID | HET | Uniprot Name | EC Number | Cavity Similarity |
Align |
---|---|---|---|---|---|
3iu7 | FCD | Methionine aminopeptidase 2 | / | 1.000 | |
3pke | Y10 | Methionine aminopeptidase 2 | / | 0.671 | |
2evc | FC3 | Methionine aminopeptidase | / | 0.596 | |
3pkd | Y10 | Methionine aminopeptidase 2 | / | 0.581 | |
2q94 | A04 | Methionine aminopeptidase | / | 0.576 | |
2p99 | YE6 | Methionine aminopeptidase | / | 0.575 | |
2evm | FC2 | Methionine aminopeptidase | / | 0.574 | |
3pka | Y02 | Methionine aminopeptidase 2 | / | 0.571 | |
3pkb | Y16 | Methionine aminopeptidase 2 | / | 0.571 | |
2q92 | B23 | Methionine aminopeptidase | / | 0.552 | |
4flk | Y10 | Methionine aminopeptidase 1 | / | 0.550 | |
2g6p | HM2 | Methionine aminopeptidase 1 | / | 0.532 | |
4iks | TFD | Methionine aminopeptidase 1 | / | 0.529 | |
2nq7 | HM5 | Methionine aminopeptidase 1 | / | 0.527 | |
2gg8 | U15 | Methionine aminopeptidase | / | 0.524 | |
2q93 | B21 | Methionine aminopeptidase | / | 0.520 | |
3iu8 | T03 | Methionine aminopeptidase 2 | / | 0.518 | |
1r5g | AO1 | Methionine aminopeptidase 2 | / | 0.516 | |
2q96 | A18 | Methionine aminopeptidase | / | 0.508 | |
1qzy | TDE | Methionine aminopeptidase 2 | / | 0.497 | |
2p98 | YE7 | Methionine aminopeptidase | / | 0.495 | |
4fll | YZ6 | Methionine aminopeptidase 1 | / | 0.495 | |
3iu9 | T07 | Methionine aminopeptidase 2 | / | 0.488 | |
2ggb | U17 | Methionine aminopeptidase | / | 0.484 | |
4hxx | 1AY | Methionine aminopeptidase 1 | / | 0.476 | |
4ikt | TFV | Methionine aminopeptidase 1 | / | 0.470 | |
4fli | Y16 | Methionine aminopeptidase 1 | / | 0.467 | |
4ikr | PVP | Methionine aminopeptidase 1 | / | 0.467 | |
2gg0 | U11 | Methionine aminopeptidase | / | 0.465 | |
2gg9 | U16 | Methionine aminopeptidase | / | 0.465 | |
3d27 | W29 | Methionine aminopeptidase | / | 0.465 | |
2gg3 | U13 | Methionine aminopeptidase | / | 0.464 | |
1x1b | SAH | C-20 methyltransferase | / | 0.463 | |
4iku | SHX | Methionine aminopeptidase 1 | / | 0.462 | |
1r5h | AO2 | Methionine aminopeptidase 2 | / | 0.460 | |
1xnz | FCD | Methionine aminopeptidase | / | 0.459 | |
1x1d | SAH | C-20 methyltransferase | / | 0.452 | |
1c23 | MPH | Methionine aminopeptidase | / | 0.448 | |
2gg2 | U12 | Methionine aminopeptidase | / | 0.448 | |
4flj | Y08 | Methionine aminopeptidase 1 | / | 0.448 | |
2aou | CQA | Histamine N-methyltransferase | 2.1.1.8 | 0.440 |