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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3ie3N11Glutathione S-transferase P2.5.1.18

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
3ie3N11Glutathione S-transferase P2.5.1.181.000
3gusN11Glutathione S-transferase P2.5.1.180.608
1aqxGTDGlutathione S-transferase P2.5.1.180.584
4pgtGBXGlutathione S-transferase P2.5.1.180.579
13gsSASGlutathione S-transferase P2.5.1.180.574
1pgtGTXGlutathione S-transferase P2.5.1.180.568
1gtiGTBGlutathione S-transferase P 12.5.1.180.567
2a2sGSNGlutathione S-transferase P2.5.1.180.564
2oa7GTXGlutathione S-transferase P 12.5.1.180.554
2oadGTBGlutathione S-transferase P 12.5.1.180.545
12gs0HHGlutathione S-transferase P2.5.1.180.544
17gsGTXGlutathione S-transferase P2.5.1.180.541
3pgtGBXGlutathione S-transferase P2.5.1.180.533
3csjCBLGlutathione S-transferase P2.5.1.180.531
2j9hGTXGlutathione S-transferase P2.5.1.180.529
2glrGTXGlutathione S-transferase P 12.5.1.180.526
9gssGTXGlutathione S-transferase P2.5.1.180.508
1aqv0HGGlutathione S-transferase P2.5.1.180.480
2pgtGPRGlutathione S-transferase P2.5.1.180.478
1gssLEEGlutathione S-transferase P2.5.1.180.468
3uzwNAP3-oxo-5-beta-steroid 4-dehydrogenase/0.450
1xddAAYIntegrin alpha-L/0.444
2ifaFMNUncharacterized protein/0.444
2vd0D27Hematopoietic prostaglandin D synthase/0.441