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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3idbANPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.11

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
3idbANPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.111.000
4xw4ANPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.658
3x2wATPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.642
4iacACPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.629
3x2uATPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.583
3x2vATPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.566
3o7lANPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.539
2c1bCQPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.496
4iakADPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.493
3dndLL2cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.492
4dg3ANPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.492
1jbpADPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.482
1q8tY27cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.482
2gu8796cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.478
2f7x4EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.476
4iayADPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.474
3vqhIQBcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.473
3e8eG98cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.471
1ydtIQBcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.470
1q8uH52cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.468
4ekkANPRAC-alpha serine/threonine-protein kinase2.7.11.10.468
4dh5ADPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.465
2uzwSS4cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.464
3e8cG96cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.457
4iazADPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.457
2vo7M05cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.455
4yxsEMUcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.455
3idcANPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.454
5iqiGNPBifunctional AAC/APH2.3.10.453
3ow3SMYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.452
2uw5GVNcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.447
1q24ATPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.446
2oh02PYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.444