sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Cavities are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 3hsc | ADP | Heat shock cognate 71 kDa protein |
| PDB ID | HET | Uniprot Name | EC Number | Cavity Similarity |
Align |
|---|---|---|---|---|---|
| 3hsc | ADP | Heat shock cognate 71 kDa protein | / | 1.000 | |
| 1ngc | ADP | Heat shock cognate 71 kDa protein | / | 0.707 | |
| 1ngb | ADP | Heat shock cognate 71 kDa protein | / | 0.575 | |
| 1nge | ATP | Heat shock cognate 71 kDa protein | / | 0.575 | |
| 1ats | ADP | Heat shock cognate 71 kDa protein | / | 0.561 | |
| 1atr | ADP | Heat shock cognate 71 kDa protein | / | 0.556 | |
| 1ngh | ATP | Heat shock cognate 71 kDa protein | / | 0.544 | |
| 1ngi | ANP | Heat shock cognate 71 kDa protein | / | 0.523 | |
| 2qwr | ANP | Heat shock cognate 71 kDa protein | / | 0.518 | |
| 2qwq | ADP | Heat shock cognate 71 kDa protein | / | 0.517 | |
| 1ngj | ANP | Heat shock cognate 71 kDa protein | / | 0.499 | |
| 2qwn | ADP | Heat shock cognate 71 kDa protein | / | 0.495 | |
| 1ngd | ADP | Heat shock cognate 71 kDa protein | / | 0.473 | |
| 5f2r | ACP | 78 kDa glucose-regulated protein | / | 0.467 | |
| 3ldl | ATP | 78 kDa glucose-regulated protein | / | 0.465 | |
| 2qwl | ADP | Heat shock cognate 71 kDa protein | / | 0.455 |