Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3hgoFMN12-oxophytodienoate reductase 31.3.1.42

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
3hgoFMN12-oxophytodienoate reductase 31.3.1.421.000
2hs8FMN12-oxophytodienoate reductase 31.3.1.420.630
1q45FMN12-oxophytodienoate reductase 31.3.1.420.622
3hgsFMN12-oxophytodienoate reductase 31.3.1.420.613
1icpFMN12-oxophytodienoate reductase 11.3.1.420.602
1icqFMN12-oxophytodienoate reductase 11.3.1.420.580
4tmbFMNOld yellow enzyme/0.564
3hgrFMN12-oxophytodienoate reductase 11.3.1.420.555
1icsFMN12-oxophytodienoate reductase 11.3.1.420.549
2q3oFMN12-oxophytodienoate reductase 31.3.1.420.535
1vjiFMN12-oxophytodienoate reductase 11.3.1.420.534
2abbFMNPentaerythritol tetranitrate reductase/0.530
4rnuFMNNADPH dehydrogenase 11.6.99.10.529
3f03FMNPentaerythritol tetranitrate reductase/0.527
1h63FMNPentaerythritol tetranitrate reductase/0.526
1vyrFMNPentaerythritol tetranitrate reductase/0.525
4rnvFMNNADPH dehydrogenase 11.6.99.10.523
1h50FMNPentaerythritol tetranitrate reductase/0.520
2hs6FMN12-oxophytodienoate reductase 31.3.1.420.520
3p74FMNPentaerythritol tetranitrate reductase/0.520
3p82FMNPentaerythritol tetranitrate reductase/0.510
4jicFMNGTN Reductase/0.495
2q3rFMN12-oxophytodienoate reductase 11.3.1.420.493
4e2bFMNDehydrogenase/0.482
3atzFMNProstaglandin F2a synthase/0.474
3gkaFMNN-ethylmaleimide reductase/0.473
3p62FMNPentaerythritol tetranitrate reductase/0.469
4a3uFMNNADH:flavin oxidoreductase/NADH oxidase/0.467
1h51FMNPentaerythritol tetranitrate reductase/0.464
4rnwFMNNADPH dehydrogenase 11.6.99.10.464
4m5pFMNNADPH dehydrogenase/0.462
3l5lFMNXenobiotic reductase/0.461
3p84FMNPentaerythritol tetranitrate reductase/0.461
1oyaFMNNADPH dehydrogenase 11.6.99.10.456
3tjlFMNNADPH dehydrogenase/0.456
3p67FMNPentaerythritol tetranitrate reductase/0.455
3p8jFMNPentaerythritol tetranitrate reductase/0.453
1bwkFMNNADPH dehydrogenase 11.6.99.10.451
1oycFMNNADPH dehydrogenase 11.6.99.10.450
1z44FMNNADPH dehydrogenase/0.445
4qnwFMNChanoclavine-I aldehyde reductase easA/0.444
5a4kFADNAD(P)H dehydrogenase [quinone] 11.6.5.20.442