Cavities are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
3gi2 | GHW | Dihydrofolate reductase | 1.5.1.3 |
PDB ID | HET | Uniprot Name | EC Number | Cavity Similarity |
Align |
---|---|---|---|---|---|
3gi2 | GHW | Dihydrofolate reductase | 1.5.1.3 | 1.000 | |
1u72 | MTX | Dihydrofolate reductase | 1.5.1.3 | 0.656 | |
3ghw | GHW | Dihydrofolate reductase | 1.5.1.3 | 0.633 | |
3nu0 | 3TU | Dihydrofolate reductase | 1.5.1.3 | 0.633 | |
1hfr | MOT | Dihydrofolate reductase | 1.5.1.3 | 0.625 | |
3ntz | 3TZ | Dihydrofolate reductase | 1.5.1.3 | 0.605 | |
3l3r | OAG | Dihydrofolate reductase | 1.5.1.3 | 0.603 | |
4m6k | FOL | Dihydrofolate reductase | 1.5.1.3 | 0.596 | |
1kms | LIH | Dihydrofolate reductase | 1.5.1.3 | 0.594 | |
4keb | FOL | Dihydrofolate reductase | 1.5.1.3 | 0.594 | |
2w3m | FOL | Dihydrofolate reductase | 1.5.1.3 | 0.591 | |
3gyf | 51P | Dihydrofolate reductase | 1.5.1.3 | 0.573 | |
3ghv | GHC | Dihydrofolate reductase | 1.5.1.3 | 0.570 | |
1ohk | COP | Dihydrofolate reductase | 1.5.1.3 | 0.565 | |
1kmv | LII | Dihydrofolate reductase | 1.5.1.3 | 0.560 | |
3k45 | 51P | Dihydrofolate reductase | 1.5.1.3 | 0.547 | |
4m6l | 21V | Dihydrofolate reductase | 1.5.1.3 | 0.547 | |
2dhf | DZF | Dihydrofolate reductase | 1.5.1.3 | 0.538 | |
1hfp | MOT | Dihydrofolate reductase | 1.5.1.3 | 0.532 | |
1pd9 | CO4 | Dihydrofolate reductase | 1.5.1.3 | 0.531 | |
1dls | MTX | Dihydrofolate reductase | 1.5.1.3 | 0.524 | |
1ohj | COP | Dihydrofolate reductase | 1.5.1.3 | 0.520 | |
2fzj | DH3 | Dihydrofolate reductase | 1.5.1.3 | 0.517 | |
3n0h | TOP | Dihydrofolate reductase | 1.5.1.3 | 0.517 | |
3d80 | Q22 | Dihydrofolate reductase | 1.5.1.3 | 0.515 | |
4eil | FOL | Bifunctional dihydrofolate reductase-thymidylate synthase | 1.5.1.3 | 0.507 | |
4kfj | FOL | Dihydrofolate reductase | 1.5.1.3 | 0.507 | |
1u70 | MTX | Dihydrofolate reductase | 1.5.1.3 | 0.499 | |
1drf | FOL | Dihydrofolate reductase | 1.5.1.3 | 0.492 | |
1hfq | MOT | Dihydrofolate reductase | 1.5.1.3 | 0.489 | |
1j3j | CP6 | Bifunctional dihydrofolate reductase-thymidylate synthase | 1.5.1.3 | 0.479 | |
1mvt | DTM | Dihydrofolate reductase | 1.5.1.3 | 0.476 | |
1pd8 | CO4 | Dihydrofolate reductase | 1.5.1.3 | 0.475 | |
3s7a | 684 | Dihydrofolate reductase | 1.5.1.3 | 0.475 | |
1dhf | FOL | Dihydrofolate reductase | 1.5.1.3 | 0.474 | |
4ky4 | 04J | Bifunctional dihydrofolate reductase-thymidylate synthase | 1.5.1.3 | 0.472 | |
3nxr | D2D | Dihydrofolate reductase | 1.5.1.3 | 0.470 | |
3qg2 | CP6 | Bifunctional dihydrofolate reductase-thymidylate synthase | / | 0.469 | |
3nrr | D16 | Bifunctional dihydrofolate reductase-thymidylate synthase | / | 0.467 | |
3s3v | TOP | Dihydrofolate reductase | 1.5.1.3 | 0.465 | |
1s3u | TQD | Dihydrofolate reductase | 1.5.1.3 | 0.464 | |
3jsu | KA5 | Bifunctional dihydrofolate reductase-thymidylate synthase | / | 0.462 | |
1q0r | AKT | Aclacinomycin methylesterase RdmC | 3.1.1.95 | 0.461 | |
1s3v | TQD | Dihydrofolate reductase | 1.5.1.3 | 0.459 | |
3nxv | D2F | Dihydrofolate reductase | 1.5.1.3 | 0.459 | |
1vj3 | TAB | Dihydrofolate reductase | 1.5.1.3 | 0.453 | |
1j3k | WRA | Bifunctional dihydrofolate reductase-thymidylate synthase | 1.5.1.3 | 0.452 | |
3um5 | CP6 | Bifunctional dihydrofolate reductase-thymidylate synthase | / | 0.452 | |
4dpd | DHF | Bifunctional dihydrofolate reductase-thymidylate synthase | / | 0.451 | |
3hl0 | NAD | Maleylacetate reductase | / | 0.449 | |
3nxt | D2E | Dihydrofolate reductase | 1.5.1.3 | 0.446 | |
1uho | VDN | cGMP-specific 3',5'-cyclic phosphodiesterase | / | 0.445 | |
1mmv | H4B | Nitric oxide synthase, brain | 1.14.13.39 | 0.443 | |
1j3i | WRA | Bifunctional dihydrofolate reductase-thymidylate synthase | 1.5.1.3 | 0.442 | |
1cd2 | FOL | Dihydrofolate reductase | 1.5.1.3 | 0.441 | |
3dg8 | RJ6 | Bifunctional dihydrofolate reductase-thymidylate synthase | 1.5.1.3 | 0.440 | |
4dph | P65 | Bifunctional dihydrofolate reductase-thymidylate synthase | / | 0.440 |