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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3fufBESLeukotriene A-4 hydrolase3.3.2.6

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
3fufBESLeukotriene A-4 hydrolase3.3.2.61.000
3ftxBESLeukotriene A-4 hydrolase3.3.2.60.858
2r59PH0Leukotriene A-4 hydrolase3.3.2.60.634
3fuhBESLeukotriene A-4 hydrolase3.3.2.60.621
4gaaBESLeukotriene A(4) hydrolase/0.496
3fun798Leukotriene A-4 hydrolase3.3.2.60.490