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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3dneLL1cAMP-dependent protein kinase catalytic subunit alpha2.7.11.11

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
3dneLL1cAMP-dependent protein kinase catalytic subunit alpha2.7.11.111.000
1q8wM77cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.601
2jdtI5ScAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.595
2uw6GVOcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.591
3bwjARXcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.574
2vo0M03cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.570
2vo3M04cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.568
3aglA03cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.566
2c1aI5ScAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.564
3e8eG98cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.562
2vnwM01cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.558
1xh5R68cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.555
2uzvSS5cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.550
2uw7GVPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.543
1rejB1LcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.542
3zo1SIJcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.541
3dndLL2cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.539
3e8cG96cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.537
4yxsEMUcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.537
2vo6M05cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.536
1q8uH52cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.534
3zo4QWIcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.534
2f7e2EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.532
2uw5GVNcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.529
2uzuL20cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.528
1xh6R94cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.527
2oh02PYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.527
4axaRKDcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.522
2ojf4PYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.521
1svhI08cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.520
1bx6BA1cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.518
1sveI01cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.515
3vqhIQBcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.515
2gu8796cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.510
1xh7R96cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.507
3kkvB99cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.505
2uw0GVKcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.502
3ow3SMYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.502
2f7z6EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.498
3mvhWFERAC-alpha serine/threonine-protein kinase2.7.11.10.496
4gv10XZRAC-alpha serine/threonine-protein kinase2.7.11.10.496
3oogYTPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.491
4ekl0RFRAC-alpha serine/threonine-protein kinase2.7.11.10.490
1xh9R69cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.485
1ydrIQPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.485
3cqwCQWRAC-alpha serine/threonine-protein kinase2.7.11.10.484
1svgI04cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.476
1xh8R55cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.475
3mv5XFERAC-alpha serine/threonine-protein kinase2.7.11.10.473
1q8tY27cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.470
1xh4R69cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.468
2uzwSS4cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.468
1vebI05cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.465
2c1bCQPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.465
2f7x4EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.462
2jdsL20cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.460
2uvzGVJcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.457
5dpvSKEAurora kinase A2.7.11.10.457
1xhaR68cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.456
5dt0SKEAurora kinase A2.7.11.10.453
2vo7M05cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.445
3v5w8PRBeta-adrenergic receptor kinase 12.7.11.150.442
4o0wADNAurora kinase A2.7.11.10.442
2etrY27Rho-associated protein kinase 12.7.11.10.441
2uztSS3cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.440