Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3cluFADElectron transfer flavoprotein subunit alpha

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
3cluFADElectron transfer flavoprotein subunit alpha/1.000
3cltFADElectron transfer flavoprotein subunit alpha/0.668
3clrFADElectron transfer flavoprotein subunit alpha/0.633
3clsFADElectron transfer flavoprotein subunit alpha/0.627
1o97FADElectron transfer flavoprotein subunit alpha/0.589