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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3af4GCPPantothenate kinase2.7.1.33

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
3af4GCPPantothenate kinase2.7.1.331.000
3af1GDPPantothenate kinase2.7.1.330.641
3af2ACPPantothenate kinase2.7.1.330.621
3af3GCPPantothenate kinase2.7.1.330.590
2zsbADPPantothenate kinase2.7.1.330.574
3af0GDPPantothenate kinase2.7.1.330.572
2getCOKPantothenate kinase2.7.1.330.568
2zsaADPPantothenate kinase2.7.1.330.561
2zs9ADPPantothenate kinase2.7.1.330.557
3aezGDPPantothenate kinase2.7.1.330.543
2zsdCOAPantothenate kinase2.7.1.330.533
2gevCOKPantothenate kinase2.7.1.330.511
4bfsZVSPantothenate kinase2.7.1.330.503
2zseACPPantothenate kinase2.7.1.330.497
2zs8ADPPantothenate kinase2.7.1.330.491
2gesCOKPantothenate kinase2.7.1.330.490
1esmCOAPantothenate kinase2.7.1.330.462
2geuCOKPantothenate kinase2.7.1.330.461