Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2zx7ZX7Alpha-L-fucosidase, putative

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
2zx7ZX7Alpha-L-fucosidase, putative/1.000
2zx8ZX8Alpha-L-fucosidase, putative/0.888
2zxbZXBAlpha-L-fucosidase, putative/0.633
2zx5ZX5Alpha-L-fucosidase, putative/0.621
2zx9ZX9Alpha-L-fucosidase, putative/0.615
2zx6ZX6Alpha-L-fucosidase, putative/0.605