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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2zsdCOAPantothenate kinase2.7.1.33

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
2zsdCOAPantothenate kinase2.7.1.331.000
2zsbADPPantothenate kinase2.7.1.330.574
2zs9ADPPantothenate kinase2.7.1.330.561
2getCOKPantothenate kinase2.7.1.330.558
3af3GCPPantothenate kinase2.7.1.330.557
3af0GDPPantothenate kinase2.7.1.330.552
2zsaADPPantothenate kinase2.7.1.330.543
3af4GCPPantothenate kinase2.7.1.330.524
3af1GDPPantothenate kinase2.7.1.330.519
3af2ACPPantothenate kinase2.7.1.330.519
3aezGDPPantothenate kinase2.7.1.330.511
2gevCOKPantothenate kinase2.7.1.330.501
2zs8ADPPantothenate kinase2.7.1.330.498
4bftZVTPantothenate kinase2.7.1.330.489
2gesCOKPantothenate kinase2.7.1.330.488
4bfsZVSPantothenate kinase2.7.1.330.463
4bfxZVXPantothenate kinase2.7.1.330.462
4bfvZVVPantothenate kinase2.7.1.330.451
2zseACPPantothenate kinase2.7.1.330.447
1esmCOAPantothenate kinase2.7.1.330.442