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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2zs8ADPPantothenate kinase2.7.1.33

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
2zs8ADPPantothenate kinase2.7.1.331.000
3af0GDPPantothenate kinase2.7.1.330.623
2zs9ADPPantothenate kinase2.7.1.330.583
2zsbADPPantothenate kinase2.7.1.330.579
2gevCOKPantothenate kinase2.7.1.330.558
3af1GDPPantothenate kinase2.7.1.330.546
2zsaADPPantothenate kinase2.7.1.330.545
2getCOKPantothenate kinase2.7.1.330.544
2gesCOKPantothenate kinase2.7.1.330.537
4bfsZVSPantothenate kinase2.7.1.330.522
4bfwZVWPantothenate kinase2.7.1.330.522
2zsdCOAPantothenate kinase2.7.1.330.518
3af2ACPPantothenate kinase2.7.1.330.518
3af3GCPPantothenate kinase2.7.1.330.511
3aezGDPPantothenate kinase2.7.1.330.510
3af4GCPPantothenate kinase2.7.1.330.508
2geuCOKPantothenate kinase2.7.1.330.499
4bftZVTPantothenate kinase2.7.1.330.481
4bfxZVXPantothenate kinase2.7.1.330.481
1esmCOAPantothenate kinase2.7.1.330.475
4bfvZVVPantothenate kinase2.7.1.330.474
2zseACPPantothenate kinase2.7.1.330.468