Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2z6rSAHDiphthine synthase

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
2z6rSAHDiphthine synthase/1.000
2ek2SAHDiphthine synthase/0.822
2e17SAHDiphthine synthase/0.820
2e07SAHDiphthine synthase/0.805
2e4nSAHDiphthine synthase/0.789
2owuSAHDiphthine synthase/0.789
2ed5SAHDiphthine synthase/0.770
2eeqSAHDiphthine synthase/0.757
2pb6SAHDiphthine synthase/0.745
1wngSAHDiphthine synthase/0.742
2el0SAHDiphthine synthase/0.734
2huvSAHDiphthine synthase/0.732
2eh4SAHDiphthine synthase/0.730
2e15SAHDiphthine synthase/0.729
2hutSAHDiphthine synthase/0.725
2owkSAHDiphthine synthase/0.723
2huqSAHDiphthine synthase/0.722
2el3SAHDiphthine synthase/0.720
2dsiSAHDiphthine synthase/0.713
2ejjSAHDiphthine synthase/0.708
2dv4SAHDiphthine synthase/0.707
2ek3SAHDiphthine synthase/0.702
2owgSAHDiphthine synthase/0.696
2eh2SAHDiphthine synthase/0.690
2eldSAHDiphthine synthase/0.686
2pcaSAHDiphthine synthase/0.684
2p9dSAHDiphthine synthase/0.681
2ek4SAHDiphthine synthase/0.676
2dekSAHDiphthine synthase/0.675
2p6iSAHDiphthine synthase/0.670
2e8rSAHDiphthine synthase/0.669
2emuSAHDiphthine synthase/0.663
2eniSAHDiphthine synthase/0.662
2dv5SAHDiphthine synthase/0.661
2ehlSAHDiphthine synthase/0.659
2p6lSAHDiphthine synthase/0.657
2dxwSAHDiphthine synthase/0.655
2dv7SAHDiphthine synthase/0.653
2p5cSAHDiphthine synthase/0.652
2ed3SAHDiphthine synthase/0.651
2emrSAHDiphthine synthase/0.650
2dsgSAHDiphthine synthase/0.649
2eh5SAHDiphthine synthase/0.649
2dxxSAHDiphthine synthase/0.648
2p5fSAHDiphthine synthase/0.648
2p6kSAHDiphthine synthase/0.648
2dshSAHDiphthine synthase/0.644
1vceSAHDiphthine synthase/0.641
2pb5SAHDiphthine synthase/0.635
2dv3SAHDiphthine synthase/0.632
2hr8SAHDiphthine synthase/0.628
2huxSAHDiphthine synthase/0.628
2owvSAHDiphthine synthase/0.627
2pciSAHDiphthine synthase/0.627
2ejkSAHDiphthine synthase/0.626
2p2xSAHDiphthine synthase/0.624
2e8hSAHDiphthine synthase/0.616
2e8qSAHDiphthine synthase/0.610
2dxvSAHDiphthine synthase/0.608
2e8sSAHDiphthine synthase/0.604
2e08SAHDiphthine synthase/0.603
2pckSAHDiphthine synthase/0.600
2e16SAHDiphthine synthase/0.599
2eleSAHDiphthine synthase/0.594
2pb4SAHDiphthine synthase/0.594
2pchSAHDiphthine synthase/0.590
2eglSAHDiphthine synthase/0.589
2ek7SAHDiphthine synthase/0.586
2e7rSAHDiphthine synthase/0.585
2pcgSAHDiphthine synthase/0.580
2egsSAHDiphthine synthase/0.577
2p6dSAHDiphthine synthase/0.575
2en5SAHDiphthine synthase/0.573
2owfSAHDiphthine synthase/0.573
2pcmSAHDiphthine synthase/0.570
2egbSAHDiphthine synthase/0.568
2ekaSAHDiphthine synthase/0.555
2ejzSAHDiphthine synthase/0.534
1fxsNAPGDP-L-fucose synthase/0.454
2q4bNAPUncharacterized protein At5g02240/0.453
2cf6NAPCinnamyl alcohol dehydrogenase 51.1.1.1950.452
3up5FAD2-oxo-Delta(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase1.14.13.1600.451
1bsvNDPGDP-L-fucose synthase/0.448
1tj0FADBifunctional protein PutA1.5.5.20.448
4iqlFMNEnoyl-(Acyl-carrier-protein) reductase II/0.448
1f8fNADBenzyl alcohol dehydrogenase/0.446
1xe55FEPlasmepsin-23.4.23.390.446
1a72PADAlcohol dehydrogenase E chain1.1.1.10.444
3lqfNADGalactitol dehydrogenase/0.442
3to6LYS_CMCHistone acetyltransferase ESA1/0.442
4q71FADBifunctional protein PutA/0.442
1hdcCBO3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase1.1.1.530.441
1q41IXMGlycogen synthase kinase-3 beta2.7.11.260.441