Cavities are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
2w93 | TPP | Pyruvate decarboxylase isozyme 1 |
PDB ID | HET | Uniprot Name | EC Number | Cavity Similarity |
Align |
---|---|---|---|---|---|
2w93 | TPP | Pyruvate decarboxylase isozyme 1 | / | 1.000 | |
2vk4 | TPP | Pyruvate decarboxylase | 4.1.1.1 | 0.558 | |
2vk8 | TPP | Pyruvate decarboxylase isozyme 1 | / | 0.556 | |
1ovm | TPP | Indole-3-pyruvate decarboxylase | 4.1.1.74 | 0.544 | |
1qpb | TPP | Pyruvate decarboxylase isozyme 1 | / | 0.510 | |
4zp1 | TPP | Pyruvate decarboxylase | 4.1.1.1 | 0.450 | |
2giv | ACO | Histone acetyltransferase KAT8 | / | 0.444 |