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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2vo6M05cAMP-dependent protein kinase catalytic subunit alpha2.7.11.11

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
2vo6M05cAMP-dependent protein kinase catalytic subunit alpha2.7.11.111.000
2uw0GVKcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.701
2c1bCQPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.641
2f7z6EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.619
2vo7M05cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.618
2vo0M03cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.616
2jdsL20cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.614
2ojf4PYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.613
2gu8796cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.609
2uw5GVNcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.607
2uzuL20cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.604
1q8tY27cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.601
2vo3M04cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.601
1ydrIQPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.594
2f7x4EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.594
2f7e2EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.583
2uzwSS4cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.582
3ow3SMYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.582
4axaRKDcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.576
2jdtI5ScAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.574
2uw7GVPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.571
3dndLL2cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.570
2oh02PYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.569
1sveI01cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.565
1ydtIQBcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.559
2uw4L15cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.559
3zo1SIJcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.559
1q8uH52cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.556
2c1aI5ScAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.555
1xh6R94cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.553
3vqhIQBcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.553
2vnwM01cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.551
1xh5R68cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.549
1svhI08cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.541
1q8wM77cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.539
1xh7R96cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.534
2uztSS3cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.531
2uzvSS5cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.530
2uw6GVOcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.528
3zo4QWIcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.526
1xh8R55cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.525
1vebI05cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.515
1xhaR68cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.510
3e8cG96cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.508
3l9mL9McAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.505
1svgI04cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.497
1xh4R69cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.493
2gnlH52cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.491
4yxsEMUcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.483
1xh9R69cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.478
4xw4ANPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.475
4c34STUcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.473
2uvzGVJcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.471
3ambVX6cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.469
3aglA03cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.467
2gnfY27cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.463
3amaSKEcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.462
3e8eG98cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.456
2gnhH52cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.455
4iacACPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.448
1stcSTUcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.447
3bwjARXcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.440