sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Distribution of Cavity similarities measured by Shaper

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Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
2qwl	ADP	Heat shock cognate 71 kDa protein

Complex with similar cavities

PDB ID	HET	Uniprot Name	EC Number	Cavity Similarity	Align
2qwl	ADP	Heat shock cognate 71 kDa protein	/	1.000
2qwq	ADP	Heat shock cognate 71 kDa protein	/	0.572
2qwr	ANP	Heat shock cognate 71 kDa protein	/	0.542
1ats	ADP	Heat shock cognate 71 kDa protein	/	0.519
1atr	ADP	Heat shock cognate 71 kDa protein	/	0.506
1ngc	ADP	Heat shock cognate 71 kDa protein	/	0.502
2qwn	ADP	Heat shock cognate 71 kDa protein	/	0.491
3hsc	ADP	Heat shock cognate 71 kDa protein	/	0.487
1ngh	ATP	Heat shock cognate 71 kDa protein	/	0.475
1ngi	ANP	Heat shock cognate 71 kDa protein	/	0.473
1ngb	ADP	Heat shock cognate 71 kDa protein	/	0.470
1nge	ATP	Heat shock cognate 71 kDa protein	/	0.454
5f2r	ACP	78 kDa glucose-regulated protein	/	0.451