sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Cavities are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 2q4b | NAP | Uncharacterized protein At5g02240 |
| PDB ID | HET | Uniprot Name | EC Number | Cavity Similarity |
Align |
|---|---|---|---|---|---|
| 2q4b | NAP | Uncharacterized protein At5g02240 | / | 1.000 | |
| 1ybm | NAP | Uncharacterized protein At5g02240 | / | 0.614 | |
| 1xq6 | NAP | Uncharacterized protein At5g02240 | / | 0.598 | |
| 4c7k | NAP | Corticosteroid 11-beta-dehydrogenase isozyme 1 | 1.1.1.146 | 0.483 | |
| 1hdo | NAP | Flavin reductase (NADPH) | / | 0.472 | |
| 2rbe | NDP | Corticosteroid 11-beta-dehydrogenase isozyme 1 | 1.1.1.146 | 0.466 | |
| 1rkx | NAD | CDP-D-glucose-4,6-dehydratase | / | 0.447 | |
| 1wvg | APR | CDP-glucose 4,6-dehydratase | 4.2.1.45 | 0.445 | |
| 3lqf | NAD | Galactitol dehydrogenase | / | 0.445 |