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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2pf8NDPAldose reductase1.1.1.21

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
2pf8NDPAldose reductase1.1.1.211.000
2pevNDPAldose reductase1.1.1.210.762
2pfhNDPAldose reductase1.1.1.210.594
1az2NAPAldose reductase1.1.1.210.586
3q65NAPAldose reductase1.1.1.210.562
2acqNAPAldose reductase1.1.1.210.549
3q67NAPAldose reductase1.1.1.210.544
1adsNAPAldose reductase1.1.1.210.526
2iq0NAPAldose reductase1.1.1.210.525
1z8aNAPAldose reductase1.1.1.210.524
2j8tNAPAldose reductase1.1.1.210.522
2acuNAPAldose reductase1.1.1.210.502
1x96NAPAldose reductase1.1.1.210.501
3v36NAPAldose reductase1.1.1.210.491
1ah4NAPAldose reductase1.1.1.210.488
2acsNAPAldose reductase1.1.1.210.486
3qkzNAPAldose reductase-related protein 11.1.1.210.469
1c9wNAPAldose reductase-related protein 2/0.460
3h7uNAPNADPH-dependent aldo-keto reductase, chloroplastic/0.450
3o3rNAPAldose reductase-related protein 11.1.1.210.446