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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2ohxNADAlcohol dehydrogenase E chain1.1.1.1

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
2ohxNADAlcohol dehydrogenase E chain1.1.1.11.000
4nfhNAJAlcohol dehydrogenase E chain1.1.1.10.622
4dwvNAJAlcohol dehydrogenase E chain1.1.1.10.618
1ht0NADAlcohol dehydrogenase 1C1.1.1.10.616
1a71NADAlcohol dehydrogenase E chain1.1.1.10.605
2oxiNADAlcohol dehydrogenase E chain1.1.1.10.605
1adcPADAlcohol dehydrogenase E chain1.1.1.10.592
1adbCNDAlcohol dehydrogenase E chain1.1.1.10.583
1hldNADAlcohol dehydrogenase E chain1.1.1.10.578
1axgNADAlcohol dehydrogenase E chain1.1.1.10.576
1hszNADAlcohol dehydrogenase 1B1.1.1.10.576
2jhfNADAlcohol dehydrogenase E chain1.1.1.10.575
4ng5NAJAlcohol dehydrogenase E chain1.1.1.10.573
5cdsNAJAlcohol dehydrogenase E chain1.1.1.10.572
1u3vNADAlcohol dehydrogenase 1B1.1.1.10.570
1axeNADAlcohol dehydrogenase E chain1.1.1.10.563
1mgoNADAlcohol dehydrogenase E chain1.1.1.10.560
1ldeNADAlcohol dehydrogenase E chain1.1.1.10.547
1agnNADAlcohol dehydrogenase class 4 mu/sigma chain1.1.1.10.525
4dlbNADS-(hydroxymethyl)glutathione dehydrogenase/0.493
1ma0NADAlcohol dehydrogenase class-31.1.1.10.486
5kjfNAJAlcohol dehydrogenase E chain1.1.1.10.482
4cpdNADAlcohol dehydrogenase/0.473
5kj6NAJAlcohol dehydrogenase E chain1.1.1.10.471
4jjiNADAlcohol dehydrogenase class-3/0.470
4c4oNADSADH/0.466
4nfsNAJAlcohol dehydrogenase E chain1.1.1.10.462
4dl9NADS-(hydroxymethyl)glutathione dehydrogenase/0.460
1cdoNADAlcohol dehydrogenase 11.1.1.10.458
4dxhNAJAlcohol dehydrogenase E chain1.1.1.10.457
2fzeAPRAlcohol dehydrogenase class-31.1.1.10.453
1hdzNADAlcohol dehydrogenase 1B1.1.1.10.451
1p0fNAPNADP-dependent alcohol dehydrogenase1.1.1.20.448
5kczNAJAlcohol dehydrogenase E chain1.1.1.10.446
3ukoNADAlcohol dehydrogenase class-3/0.442
4gl4NAIAlcohol dehydrogenase class-3/0.440