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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2nsd4PIEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.9

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
2nsd4PIEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.91.000
4tzk641Enoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.553
1p44GEQEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.533
5cp8TCUEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.532
3uic09TEnoyl-[acyl-carrier-protein] reductase [NADH]/0.531
3fnhJPJEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.529
2b365PPEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.527
4trj665Enoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.523
2b35TCLEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.520
1bvrTHTEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.490
3fnfJPMEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.489
1zsnTN2Enoyl-ACP reductase/0.456
3fne8PCEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.455
4tzt468Enoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.455
4jbtASDCytochrome P450 monooxygenase/0.451
4q71FADBifunctional protein PutA/0.451
4j6cSTRCytochrome P450 monooxygenase/0.450
2om9AJAPeroxisome proliferator-activated receptor gamma/0.447
1bvrNADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.445
2ol4JPNEnoyl-ACP reductase/0.445
5coqTCUEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.445
1kkq471Peroxisome proliferator-activated receptor alpha/0.444
4r20AERCytochrome P450 family 17 polypeptide 2/0.444
2nq8ZIDEnoyl-ACP reductase/0.441
4j6bPLOCytochrome P450 monooxygenase/0.441
3a4oSTUTyrosine-protein kinase Lyn2.7.10.20.440
4zjuNADEnoyl-[acyl-carrier-protein] reductase [NADH]/0.440