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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2inzOHPAldose reductase1.1.1.21

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
2inzOHPAldose reductase1.1.1.211.000
2iqdLPAAldose reductase1.1.1.210.886
2pdyFIDAldose reductase1.1.1.210.668
2fz8ZSTAldose reductase1.1.1.210.594
2f2kTGGAldose reductase1.1.1.210.589
3u2cSUZAldose reductase1.1.1.210.548
3s3gTLTAldose reductase1.1.1.210.529
2pdwFIDAldose reductase1.1.1.210.524
1pwmFIDAldose reductase1.1.1.210.516
2pdu393Aldose reductase1.1.1.210.500
1ef3FIDAldose reductase1.1.1.210.492
2is72CLAldose reductase1.1.1.210.480
3p2vDOYAldose reductase1.1.1.210.478
2nvcITAAldose reductase1.1.1.210.476
2pdkSBIAldose reductase1.1.1.210.468
2pdg47DAldose reductase1.1.1.210.466
1ekoI84Aldose reductase1.1.1.210.462
4gabFIDAldo-keto reductase family 1 member B101.1.10.455
1ah0SBIAldose reductase1.1.1.210.450
2fz9ZSTAldose reductase1.1.1.210.449
2pdmZSTAldose reductase1.1.1.210.445
2yneYNEGlycylpeptide N-tetradecanoyltransferase/0.444